@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2W9: (2018-02-02 )
MTFKDKVIYQIYPKSYKDSNGDGIGDLKGIKEKLPYLNDLGIDMIWLNPIYPSPQKDNGYDISDYTAIDPIFGTMEEFEQLIAEAKKYRIEIMLDMVLNHVSTEHEWFKKALAGDQHYQDFFILREEPTDWVSKFGGSAWSPFGDTGKYYLHLYDRTQADLNWRNQAVREELFKVVRFWMEKGVKGFRFDVINVIGKDEQLKNNKENDGKPEYTDKPITHTYLKELNQATFGTDSTIITVGEMSSTTIENCILYTEPSREELSMVFNFHHLKVDYENGNKWSTPPFDFAELKRLFHTWGEKMSEGNGWNALFFNNHDQPRALNRFVAIDQYRKQGAEMLATMIHLNRGTPYIYMGEEIGMIDPDYSSISDYIDVESLNAYKLLLEQGFTEKEAFRRIKAKSRDNSRTPMQWSDTEQAGFTTGKPWLKVGGKLEEINVEKELSSEDSILSYYKKLIRLRKTYPIVAQGDYHAYEANHPEVYGFLRQFEGQQLLVLTNFYDKDTRIAIPEGFTEANILIDNYSDTVLHQSLELKPYQAIALLKN

Atome Classification :

(62 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_A_4(4H8U)
?
[Raw transfer]



SUC_A_3(2PWE)
?
[Raw transfer]



TEU_A_4(4H8V)
?
[Raw transfer]



ISL_A_4(4HA1)
?
[Raw transfer]



GLC_B_6(4H7V)
?
[Raw transfer]



GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]



GLC_A_4(4H7V)
?
[Raw transfer]



GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]



GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]



SUGAR_A_2(2ZID)
DEXB_STRMU
[Raw transfer]
-
NOJ_A_5(2PWD)
?
[Raw transfer]



NOJ_B_6(2PWD)
?
[Raw transfer]



GLC_A_4(4HP5)
?
[Raw transfer]



NOJ_A_11(3GBE)
?
[Raw transfer]



CTS_B_6(2PWG)
?
[Raw transfer]



GLC_B_6(4HA1)
?
[Raw transfer]



GLC_A_4(4HOZ)
?
[Raw transfer]



CTS_A_5(2PWG)
?
[Raw transfer]



GOL_B_15(4GI8)
?
[Raw transfer]



GOL_B_10(4GI6)
?
[Raw transfer]



GLO_A_3(4M56)
O16G1_BACSU
[Raw transfer]



TRS_B_6(4GO8)
?
[Raw transfer]



GOL_B_8(4GI9)
?
[Raw transfer]



GOL_A_5(4GI6)
?
[Raw transfer]



GOL_A_5(4GIA)
?
[Raw transfer]



GOL_A_5(4GI8)
?
[Raw transfer]



GOL_B_12(4GIA)
?
[Raw transfer]



BGC_A_2(4WLC)
DEXB_STRMU
[Raw transfer]



GOL_A_3(4GIN)
?
[Raw transfer]



TRS_A_4(4GO8)
?
[Raw transfer]



GOL_A_5(4GI9)
?
[Raw transfer]



GOL_A_5(4AIE)
?
[Raw transfer]



GOL_A_5(4AIE)
?
[Raw transfer]



GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]



TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]



TRS_A_5(1ZJB)
?
[Raw transfer]



TRS_B_6(1ZJB)
?
[Raw transfer]



TRS_B_6(1ZJA)
?
[Raw transfer]



GOL_A_3(4HOW)
?
[Raw transfer]



TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]



GOL_A_3(4H2C)
?
[Raw transfer]



TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]



TRS_A_4(4GO9)
?
[Raw transfer]



TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]



TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]



TRS_B_6(4GO9)
?
[Raw transfer]



TRS_A_5(1ZJA)
?
[Raw transfer]



TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]



TRS_A_5(1ZJA)
?
[Raw transfer]



GOL_A_7(4H2C)
?
[Raw transfer]



TRS_A_2(4HOX)
?
[Raw transfer]



EDO_A_4(3GBD)
?
[Raw transfer]



GLC_A_3(3AXH)
MALX3_YEAST
[Raw transfer]



EDO_A_2(3GBD)
?
[Raw transfer]
94 HHSearch 79.3552% 27 - C1 -5BRQ - ? -
2 PsiBlast_PDB 79.0651% 30 - C1 -5BRP - ? -
1 PsiBlast_PDB 78.7451% 31 - C1 -5BRQ - ? -
93 HHSearch 78.3852% 31 - C1 -5BRP - ? -
25 PsiBlast_CBE 78.1751% 32 - C1 -5BRP - ? -
26 PsiBlast_CBE 77.8051% 31 - C1 -5BRP - ? -
102 HHSearch 75.7945% 27 - C1 -1UOK - O16G_BACCE -
100 HHSearch 74.4240% -3 - C1 -4XB3 - DEXB_STRMU -
3 PsiBlast_PDB 74.3544% 28 - C1 -1UOK - O16G_BACCE -
95 HHSearch 74.2042% 24 - C1 -5DO8 - ? -
64 PsiBlast_CBE 74.0739% -3 - C1 -4WLC 4.6 DEXB_STRMU
98 HHSearch 73.6842% 19 - C1 -4MB1 4.0 O16G1_BACSU
28 PsiBlast_CBE 73.6841% 24 - C1 -5DO8 - ? -
101 HHSearch 73.2143% 39 - C1 -4AIE 2.3 ?
27 PsiBlast_CBE 73.1141% 24 - C1 -5DO8 - ? -
105 HHSearch 73.1042% 24 - C1 -4M8U 3.1 O16G1_BACSU
4 PsiBlast_PDB 73.0541% 24 - C1 -5DO8 - ? -
103 HHSearch 72.9140% 30 - C1 -1ZJA 3.7 ?
104 HHSearch 72.8740% 28 - C1 -2PWE - ? -
65 PsiBlast_CBE 71.9539% -1 - C1 -2ZID 5.1 DEXB_STRMU
61 PsiBlast_CBE 71.8039% -4 - C1 -2ZIC 3.3 DEXB_STRMU
5 PsiBlast_PDB 71.6843% 41 - C1 -4AIE 2.3 ?
17 PsiBlast_PDB 71.4239% 25 - C1 -4GIN 2.9 ?
29 PsiBlast_CBE 71.3241% 28 - C1 -4M56 2.7 O16G1_BACSU
8 PsiBlast_PDB 71.2941% 25 - C1 -4MB1 4.0 O16G1_BACSU
6 PsiBlast_PDB 71.2741% 30 - C1 -4M8U 3.1 O16G1_BACSU
19 PsiBlast_PDB 71.2239% 28 - C1 -4GI6 3.9 ?
7 PsiBlast_PDB 71.1841% 25 - C1 -4M56 2.0 O16G1_BACSU
38 PsiBlast_CBE 71.1339% 30 - C1 -4GIA 2.9 ?
43 PsiBlast_CBE 71.0839% 30 - C1 -4GI6 2.8 ?
9 PsiBlast_PDB 71.0441% 31 - C1 -4MAZ 4.0 O16G1_BACSU
53 PsiBlast_CBE 70.9539% 28 - C1 -4HA1 4.3 ?
44 PsiBlast_CBE 70.9539% 26 - C1 -4H2C 3.9 ?
16 PsiBlast_PDB 70.3939% 29 - C1 -4GO8 4.1 ?
42 PsiBlast_CBE 70.3639% 27 - C1 -4GI8 3.0 ?
57 PsiBlast_CBE 70.2839% 27 - C1 -4H7V 4.2 ?
20 PsiBlast_PDB 70.1639% 29 - C1 -4GI8 4.2 ?
31 PsiBlast_CBE 70.0739% 30 - C1 -2PWD 5.0 ?
32 PsiBlast_CBE 70.0639% 30 - C1 -1ZJB 3.9 ?
46 PsiBlast_CBE 70.0139% 29 - C1 -4GO9 4.4 ?
39 PsiBlast_CBE 70.0139% 30 - C1 -4GIA 3.0 ?
36 PsiBlast_CBE 69.9639% 30 - C1 -4GO8 4.2 ?
35 PsiBlast_CBE 69.9339% 32 - C1 -2PWG 2.9 ?
33 PsiBlast_CBE 69.8839% 31 - C1 -1ZJA 4.0 ?
11 PsiBlast_PDB 69.8539% 29 - C1 -1ZJB 4.0 ?
10 PsiBlast_PDB 69.7839% 31 - C1 -1ZJA 3.7 ?
12 PsiBlast_PDB 69.7639% 32 - C1 -2PWD 5.0 ?
41 PsiBlast_CBE 69.6739% 31 - C1 -4GI9 2.6 ?
40 PsiBlast_CBE 69.5839% 29 - C1 -4GI9 2.9 ?
45 PsiBlast_CBE 69.2939% 31 - C1 -4GO9 4.4 ?
14 PsiBlast_PDB 69.2439% 33 - C1 -2PWG 4.1 ?
60 PsiBlast_CBE 68.9637% 38 - C1 -3GBD 3.8 ?
58 PsiBlast_CBE 67.5739% 30 - C1 -4H7V 4.5 ?
59 PsiBlast_CBE 66.3937% 38 * C1 *3GBE 3.5 ?
62 PsiBlast_CBE 65.9837% 43 - C1 -4HOW 4.2 ?
69 PsiBlast_CBE 65.7737% 42 - C1 -4HOZ 3.9 ?
68 PsiBlast_CBE 65.2037% 42 - C1 -4HP5 4.8 ?
66 PsiBlast_CBE 64.5237% 42 - C1 -4HOX 4.2 ?
71 PsiBlast_CBE 63.2634% 29 - C1 -3A4A 4.9 MALX3_YEAST
97 HHSearch 62.7935% 25 - C1 -3A4A 4.9 MALX3_YEAST
73 PsiBlast_CBE 62.2233% 30 - C1 -3AXI 4.6 MALX3_YEAST
74 PsiBlast_CBE 62.0933% 29 - C1 -3AXH 2.9 MALX3_YEAST