@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2X9: (2018-02-02 )
MIKVYTSPSCTSCRKARAWLQANQLEFEEKNIFAEPLTESEIKKILAATEGGVQDIISTRSKIYEKLGIDFNELTLKQMIVLFKEYPSLLRRPILIDEKRILIGFNEDEIRSFVPREIRCVARNLIYLQNNNILNS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IMD_A_3(3IHQ)
SPX_BACSU
[Raw transfer]
1 PsiBlast_PDB 96.4157%-198 - C1 -1Z3E - SPX_BACSU -
33 HHSearch 95.7155%-198 - C1 -1Z3E - SPX_BACSU -
2 PsiBlast_PDB 94.3057%-187 - C1 -3GFK - SPX_BACSU -
4 PsiBlast_PDB 88.2255%-173 - C1 -3IHQ 3.9 SPX_BACSU
34 HHSearch 81.7457% - - C- -3L78 - SPX_STRMU -
3 PsiBlast_PDB 81.7457% - - C- -3L78 - SPX_STRMU -
23 Fugue 79.7856% 29 - C1 -1Z3E - SPX_BACSU -
39 HHSearch 64.5218%-163 - C1 -1S3C - ARSC1_ECOLX -
10 PsiBlast_PDB 64.4924%-205 - C1 -1SK2 - ARSC1_ECOLX -
12 PsiBlast_PDB 64.3524%-201 - C1 -1I9D - ARSC1_ECOLX -
15 PsiBlast_PDB 64.1923%-198 - C1 -1S3C - ARSC1_ECOLX -
16 PsiBlast_PDB 63.1323%-201 - C1 -1SD9 - ARSC1_ECOLX -
9 PsiBlast_PDB 63.1224%-210 - C1 -1S3D - ARSC1_ECOLX -
43 HHSearch 62.7223% -92 - C1 -1RW1 - ? -
37 HHSearch 62.6920%-157 - C1 -1S3D - ARSC1_ECOLX -
11 PsiBlast_PDB 61.9824%-193 - C1 -1SD8 - ARSC1_ECOLX -
44 HHSearch 60.0225% -48 - C- -3GKX - ? -
41 HHSearch 59.9527% -38 - C1 -2M46 - ? -
46 HHSearch 59.4019% -86 - C1 -2KOK - ? -
6 PsiBlast_PDB 58.8427% -44 - C1 -2M46 - ? -