@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y301: (2018-02-02 )
MSKTIAINAGSSSLKWQLYQMPEETVVAKGIVERIGLQDSIFTIKYGDNQKFEQIMDIENHEVAVKMLLDQLIELQILSSYDEITGVGHRVVHGGETYGDSVVIDEKVMDRIAELAEFAPLHNPANLMGIKAFKKILPDILSVAVFDTSFHSTMPKQNYLYSLPVSYYEDFKVRKYGFHGTSHRYVSERAAKLLNKPIEELKIITCHLGNGVSITAVDGGKSMDTSMGFTPLAGVTMGTRSGDIDPAVLPYLMEKLEIDIDEMINVLNKKSGLLGLTGLSSDMRDLEKNYEKEHIRLAYDIFVDRIRKYIGGYVTTMNGVDAIVFTAGIGENDGHVRSEIIKGMSWFGCEIDPALNELRGEEVDISTKESKVRVLVIPTDEELMIARDVERLRG

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AQP_A_4(4FWN)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E20)
TDCD_SALTY
[Raw transfer]




ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E1Z)
TDCD_SALTY
[Raw transfer]




ANP_E_5(1X3N)
TDCD_SALTY
[Raw transfer]




GTP_A_4(4FWQ)
TDCD_SALTY
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




ANP_A_5(4XH1)
TDCD_SALTY
[Raw transfer]




CTP_A_6(4FWS)
TDCD_SALTY
[Raw transfer]




ADP_C_3(1X3M)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




GDP_A_4(4FWP)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ANP_A_4(4XH5)
TDCD_SALTY
[Raw transfer]




AMP_B_8(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_E_5(1TUU)
ACKA_METTE
[Raw transfer]




APC_A_3(4IZ9)
ACKA_MYCA1
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_B_5(1TUY)
ACKA_METTE
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_E_5(1TUU)
ACKA_METTE
[Raw transfer]




ADP_A_4(1TUY)
ACKA_METTE
[Raw transfer]




AMP_F_6(1TUU)
ACKA_METTE
[Raw transfer]




5GP_A_5(4FWO)
TDCD_SALTY
[Raw transfer]




AMP_A_3(4FWK)
TDCD_SALTY
[Raw transfer]




C5P_A_4(4FWR)
TDCD_SALTY
[Raw transfer]




PGE_B_6(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




EDO_A_2(4FWL)
TDCD_SALTY
[Raw transfer]




EDO_A_2(4FWP)
TDCD_SALTY
[Raw transfer]




ACY_B_7(1TUY)
ACKA_METTE
[Raw transfer]




16 PsiBlast_PDB 88.9741% -77 - C8 -1X3N 5.9 TDCD_SALTY
44 HHSearch 88.7242% -79 - C8 -4FWM 5.8 TDCD_SALTY
13 PsiBlast_PDB 88.5641% -76 - C8 -4FWL 2.1 TDCD_SALTY
43 HHSearch 88.1442% -73 - C8 -4XH4 6.4 TDCD_SALTY
20 PsiBlast_PDB 88.0641% -77 - C8 -4FWK 5.3 TDCD_SALTY
32 PsiBlast_CBE 87.7341% -78 - C8 -4FWP 6.1 TDCD_SALTY
12 PsiBlast_PDB 87.6442% -72 - C8 -4XH4 6.4 TDCD_SALTY
30 PsiBlast_CBE 87.4441% -75 - C8 -4FWR 3.9 TDCD_SALTY
18 PsiBlast_PDB 87.4441% -76 - C8 -2E1Z 9.7 TDCD_SALTY
14 PsiBlast_PDB 87.3141% -78 - C8 -4FWM 5.8 TDCD_SALTY
42 HHSearch 87.2344% -74 - C8 -4IJN 6.4 ACKA_MYCS2
33 PsiBlast_CBE 87.1041% -76 - C8 -4FWO 5.8 TDCD_SALTY
31 PsiBlast_CBE 86.9941% -75 - C8 -4FWQ 6.4 TDCD_SALTY
29 PsiBlast_CBE 86.8541% -75 - C8 -4FWS 5.7 TDCD_SALTY
36 PsiBlast_CBE 86.8441% -76 - C8 -4XH5 6.5 TDCD_SALTY
35 PsiBlast_CBE 86.8041% -76 - C8 -4XH1 5.3 TDCD_SALTY
15 PsiBlast_PDB 86.7541% -75 - C8 -1X3M 5.4 TDCD_SALTY
19 PsiBlast_PDB 86.7041% -73 - C8 -2E20 9.6 TDCD_SALTY
34 PsiBlast_CBE 86.4541% -73 - C8 -4FWN 7.6 TDCD_SALTY
8 PsiBlast_PDB 85.5042% -71 - C8 -4IJN 6.4 ACKA_MYCS2
28 PsiBlast_CBE 85.3242% -71 - C8 -4IJN 6.3 ACKA_MYCS2
57 Fugue 82.7352% 2 - C8 -1G99 6.0 ACKA_METTE
2 PsiBlast_PDB 82.1852% 3 - C8 -1G99 6.0 ACKA_METTE
4 PsiBlast_PDB 81.9352% 5 - C8 -1TUY 5.3 ACKA_METTE
46 HHSearch 81.1353% 2 - C8 -1G99 6.5 ACKA_METTE
48 HHSearch 80.9753% 5 - C8 -1TUU 5.7 ACKA_METTE
21 PsiBlast_CBE 80.7152% 3 - C8 -1G99 6.5 ACKA_METTE
3 PsiBlast_PDB 80.4752% 7 - C8 -1TUU 5.7 ACKA_METTE
23 PsiBlast_CBE 79.3252% 9 - C8 -1TUU 5.0 ACKA_METTE
22 PsiBlast_CBE 78.8352% 5 - C8 -1TUY 4.5 ACKA_METTE
45 HHSearch 77.3745% -19 * C8 *3R9P 2.0 ACKA_MYCPA
27 PsiBlast_CBE 76.5643% -15 - C8 -3R9P 2.6 ACKA_MYCPA
7 PsiBlast_PDB 76.1243% -17 - C8 -3R9P 2.0 ACKA_MYCPA
10 PsiBlast_PDB 74.0144% -9 - C8 -4IZ9 5.7 ACKA_MYCA1