@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y325: (2018-02-03 )
MEVKELEQLIGKNFHYYQTGQVADYIPALAEVDPKQLGMAIYDLDTKQLIEGGDADVRFAIESMSKVPVLLLAIKDNGIEKVFQTINTEPTGFAFNSIMNMEINHRKHPMNPFVNAGAIATTSLIAGKDADEKFERILSFMKEICDDPNITLNEEIYHSESRTGDINRSLAYYMKGNQMIEGDVPEILDAYFRQCSLNVTATGIAKLAAVLANKGIAPWNGKQIITEESATIVKSIMTTAGLYDESGEFSVHVGVPAKSGVGGGLMAAVPNRYGIGVFSPALDPFGNSAAGIQLLKDVVKELDADIFE

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLU_A_3(3VP1)
GLSK_HUMAN
[Raw transfer]



GLU_A_3(3CZD)
GLSK_HUMAN
[Raw transfer]



GLN_A_2(3VP0)
GLSK_HUMAN
[Raw transfer]



GLU_A_3(3IHA)
?
[Raw transfer]



ONL_A_2(4O7D)
GLSK_HUMAN
[Raw transfer]



GLU_A_3(3AGE)
?
[Raw transfer]



ONL_A_3(3BRM)
GLSA1_BACSU
[Raw transfer]



ONL_A_2(4O7D)
GLSK_HUMAN
[Raw transfer]



DON_A_4(2OSU)
GLSA1_BACSU
[Raw transfer]



GLU_B_4(3IHA)
?
[Raw transfer]



GLU_A_3(3IHB)
?
[Raw transfer]



GLU_B_4(3IHB)
?
[Raw transfer]



EDO_B_12(1U60)
GLSA1_ECOLI
[Raw transfer]



EDO_B_12(1U60)
GLSA1_ECOLI
[Raw transfer]



EDO_D_15(1U60)
GLSA1_ECOLI
[Raw transfer]



EDO_A_8(1U60)
GLSA1_ECOLI
[Raw transfer]



EDO_D_16(1U60)
GLSA1_ECOLI
[Raw transfer]
66 HHSearch 94.2740%-117 - C4 -2PBY - GLSA_GEOKA -
1 PsiBlast_PDB 93.6840%-117 - C4 -2PBY - GLSA_GEOKA -
67 HHSearch 93.4140%-110 - C4 -2PBY - GLSA_GEOKA -
71 HHSearch 87.6540% -75 - C4 -1MKI - GLSA1_BACSU -
28 PsiBlast_CBE 85.2139% -49 - C4 -5HL1 - GLSK_HUMAN -
17 PsiBlast_PDB 85.0639% -48 - C4 -5FI6 - GLSK_HUMAN -
30 PsiBlast_CBE 84.6139% -45 - C4 -5FI6 - GLSK_HUMAN -
70 HHSearch 84.6036% -42 - C4 -5JYO - GLSK_HUMAN -
72 HHSearch 84.4036% -43 - C4 -3VOY - GLSK_HUMAN -
73 HHSearch 84.3436% -43 - C4 -4O7D 3.6 GLSK_HUMAN
16 PsiBlast_PDB 84.3339% -45 - C4 -5FI2 - GLSK_HUMAN -
55 PsiBlast_CBE 84.2039% -42 - C4 -5I94 - GLSK_HUMAN -
31 PsiBlast_CBE 84.1139% -42 - C4 -5FI6 - GLSK_HUMAN -
57 PsiBlast_CBE 84.1039% -43 - C4 -5I94 - GLSK_HUMAN -
15 PsiBlast_PDB 84.0539% -44 - C4 -4O7D 3.6 GLSK_HUMAN
41 PsiBlast_CBE 83.9639% -42 - C4 -5JYO - GLSK_HUMAN -
29 PsiBlast_CBE 83.9539% -45 - C4 -5FI7 - GLSK_HUMAN -
51 PsiBlast_CBE 83.9239% -49 - C4 -3SS5 - GLSK_MOUSE -
49 PsiBlast_CBE 83.9039% -49 - C4 -3SS5 - GLSK_MOUSE -
20 PsiBlast_PDB 83.8839% -43 - C4 -3UO9 - GLSK_HUMAN -
7 PsiBlast_PDB 83.6839% -43 - C4 -3CZD 3.3 GLSK_HUMAN
11 PsiBlast_PDB 83.6739% -47 - C4 -3VP1 3.4 GLSK_HUMAN
10 PsiBlast_PDB 83.0639% -42 - C4 -3VP0 2.5 GLSK_HUMAN
21 PsiBlast_CBE 80.3637% -16 - C4 -1U60 3.2 GLSA1_ECOLI
23 PsiBlast_CBE 80.3437% -17 - C4 -1U60 3.3 GLSA1_ECOLI
4 PsiBlast_PDB 79.8337% -15 - C4 -1U60 2.9 GLSA1_ECOLI
69 HHSearch 79.5438% -13 - C4 -1U60 3.3 GLSA1_ECOLI
3 PsiBlast_PDB 77.8339% -8 - C4 -3BRM 3.4 GLSA1_BACSU
62 PsiBlast_CBE 76.1139% -29 - C4 -3IHA 3.1 ?
60 PsiBlast_CBE 76.0539% -27 - C4 -3IHB 2.9 ?
64 PsiBlast_CBE 76.0139% -28 - C4 -3AGE 3.2 ?
61 PsiBlast_CBE 75.4039% -28 - C4 -3IHA 3.3 ?
59 PsiBlast_CBE 75.3039% -28 - C4 -3IHB 2.6 ?