@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y340: (2018-02-03 )
MTEPKLIDPRNLYHTEKFPKQDQDTPALQQNMIPVPDCGEESYEGNNQLENRRVLITGGDSGIGRAAAIAFAREGADIALQFFPGEEKDAEEVAKYVKDAGRKIVLLPFDLRDEQAPKEIIDKAVSELGGLDTMVLNAGQQISCQSIAELPLEQVKDTFMINIIAMFALVKEAVPHIPAGGAIVTTTSVQAFNPSEHLLDYAATKASIANFTIGLAKQLAPKGIRVNGVAPGPIWTPLQLDEGQPSDSIPEFGQQSLLERAGQPGELAPVYVFLASNKASYVTAQIYGVTGGEAINL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_D_15(3R3S)
?
[Raw transfer]




NAD_B_5(5U8P)
?
[Raw transfer]




NAD_C_12(3R3S)
?
[Raw transfer]




NAD_C_12(3R3S)
?
[Raw transfer]




NAD_A_5(3R3S)
?
[Raw transfer]




NAD_B_8(3R3S)
?
[Raw transfer]




NAD_B_5(5U8P)
?
[Raw transfer]




NAD_A_3(5U8P)
?
[Raw transfer]




EDO_D_19(5U2W)
?
[Raw transfer]




EDO_B_11(5U2W)
?
[Raw transfer]




FMT_C_13(3R3S)
?
[Raw transfer]




FMT_A_6(3R3S)
?
[Raw transfer]




1 PsiBlast_PDB 92.1856% -67 - C3 -3R3S 12.1 ?
119 HHSearch 91.8256% -66 - C3 -3R3S 12.2 ?
118 HHSearch 91.8051% -62 - C3 -5U8P 12.0 ?
22 PsiBlast_CBE 91.5556% -66 - C3 -3R3S 12.2 ?
24 PsiBlast_CBE 91.4250% -62 - C3 -5U8P 12.0 ?
2 PsiBlast_PDB 91.2250% -61 - C3 -5JYD - ? -
23 PsiBlast_CBE 91.0156% -67 - C3 -3R3S 11.7 ?
3 PsiBlast_PDB 90.8050% -62 - C3 -5U8P 7.4 ?
31 PsiBlast_CBE 90.5950% -60 - C3 -5JYD - ? -
21 PsiBlast_CBE 90.4756% -65 - C3 -3R3S 11.7 ?
123 HHSearch 86.0747% -80 - C3 -3IJR - ? -
124 HHSearch 85.5547% -78 - C3 -3IJR - ? -
4 PsiBlast_PDB 77.4846% 11 - C3 -3I3O - ? -
37 PsiBlast_CBE 76.5046% 9 - C3 -3I3O - ? -
5 PsiBlast_PDB 76.3846% 12 - C3 -3IJR - ? -
36 PsiBlast_CBE 75.9746% 12 - C3 -3I3O - ? -
38 PsiBlast_CBE 75.7546% 11 - C3 -3I3O - ? -
80 PsiBlast_CBE 75.6932% -75 - C3 -1AHH - HDHA_ECOLI -
14 PsiBlast_PDB 75.3832% -76 - C3 -3TZQ - ? -
35 PsiBlast_CBE 75.2346% 12 - C3 -3I3O - ? -