@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y3B8: (2018-02-04 )
MIQEQKWWKEAVGYQIYPASFKDSNGDGQGDINGIREKLNYLKDLGIGFIWINPIYQSPFVDNGYDVSDYQDIEERFGTMEDFDLLLKEAHELGIKVIMDLVINHSSDQHQWFEESKKSKESPYRDYYIWVDGVDGKEPNNWTSIFGGSAWEYSHETGQYYLHVFAKEQPDLNWESEKLKEELFNMIRWWLDKGIDGFRLDAISHVKKDEYSVKATENPFSPFQNVSGIEEHLTDLKHVFEEYDIMTVGEASGVTAEEGPQWVGKDGYFDMIFEFDHIHIWQQEKEGQLDVLKLKLALSAWQTSLDGIGWNALYMENHDVPRAVSVFGDTRPDFWAMSAKAIAMMYFFLQGTPFIYQGQEIGMTNMPFESIDQVDAVDSKRLYKRLLAEGKTREEALDIIRETTRDNSRTPMQWTSEQYAGFSTHEPWLITNPNTKTINVEQQEYEPESVLQFYKNMIRIRQTNKGLIYGSYKEYLHEHPQLYVYERYLEDEQYLIMVNLTESLADYELPKEADQSWTLLLSNSSSGEFEAKGILAPYEARLYKTNK

Atome Classification :

(60 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUC_A_4(4H8U)
?
[Raw transfer]




SUC_A_4(4HPH)
?
[Raw transfer]




TEU_B_6(4H8V)
?
[Raw transfer]




BGC_B_10(3WY3)
?
[Raw transfer]




GLC_A_2(3AXI)
MALX3_YEAST
[Raw transfer]




GLC_A_4(4HOZ)
?
[Raw transfer]




GLC_B_6(4H7V)
?
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




GLC_A_2(3A4A)
MALX3_YEAST
[Raw transfer]




GLC_A_4(4H7V)
?
[Raw transfer]




ISL_A_4(4HA1)
?
[Raw transfer]




NOJ_A_11(3GBE)
?
[Raw transfer]




GLC_A_4(4HP5)
?
[Raw transfer]




NOJ_B_6(2PWD)
?
[Raw transfer]




TEU_B_6(4H8U)
?
[Raw transfer]




CTS_B_6(2PWG)
?
[Raw transfer]




NOJ_A_5(2PWD)
?
[Raw transfer]




CTS_A_5(2PWG)
?
[Raw transfer]




GLC_B_6(4HA1)
?
[Raw transfer]




GLC_A_2(3AXH)
MALX3_YEAST
[Raw transfer]




GOL_B_10(4GI6)
?
[Raw transfer]




GOL_A_5(4GI8)
?
[Raw transfer]




TRS_B_6(4GO8)
?
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




TRS_B_6(1ZJA)
?
[Raw transfer]




GOL_A_5(4GI6)
?
[Raw transfer]




GOL_A_5(4GIA)
?
[Raw transfer]




TRS_A_5(1ZJB)
?
[Raw transfer]




GOL_A_5(4GI9)
?
[Raw transfer]




GOL_A_3(4HOW)
?
[Raw transfer]




GOL_A_5(4AIE)
?
[Raw transfer]




BGC_A_8(3WY2)
?
[Raw transfer]




BGC_A_2(4WLC)
DEXB_STRMU
[Raw transfer]




GOL_B_12(4GIA)
?
[Raw transfer]




GOL_B_8(4GI9)
?
[Raw transfer]




GOL_B_15(4GI8)
?
[Raw transfer]




TRS_B_6(1ZJB)
?
[Raw transfer]




GOL_B_11(3WY2)
?
[Raw transfer]




GOL_A_3(4GIN)
?
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




TRS_A_2(4M8U)
O16G1_BACSU
[Raw transfer]




GOL_A_3(4H2C)
?
[Raw transfer]




TRS_A_4(4GO8)
?
[Raw transfer]




BGC_A_8(3WY2)
?
[Raw transfer]




TRS_B_6(4GO9)
?
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_A_4(4GO9)
?
[Raw transfer]




TRS_A_2(4HOX)
?
[Raw transfer]




TRS_A_2(4MB1)
O16G1_BACSU
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_5(2ZIC)
DEXB_STRMU
[Raw transfer]




TRS_A_5(1ZJA)
?
[Raw transfer]




TRS_A_2(4MAZ)
O16G1_BACSU
[Raw transfer]




GLO_B_7(4M56)
O16G1_BACSU
[Raw transfer]




GOL_A_7(4H2C)
?
[Raw transfer]




EDO_A_4(3GBD)
?
[Raw transfer]




EDO_A_2(3GBD)
?
[Raw transfer]




EDO_A_13(5M99)
?
[Raw transfer]




106 HHSearch 83.1342% -15 - C1 -4XB3 - DEXB_STRMU -
11 PsiBlast_PDB 82.3742% -2 - C1 -1M53 - ? -
104 HHSearch 82.2643% -8 - C1 -4AIE 3.3 ?
68 PsiBlast_CBE 80.8440% -11 - C1 -4WLC 4.6 DEXB_STRMU
13 PsiBlast_PDB 80.4442% 11 - C1 -4MB1 3.4 O16G1_BACSU
45 PsiBlast_CBE 80.2643% 4 - C1 -2PWF - ? -
26 PsiBlast_CBE 80.1444% 3 - C1 -2PWG 3.8 ?
102 HHSearch 79.9344% 11 - C1 -5BRQ - ? -
46 PsiBlast_CBE 79.8743% 3 - C1 -2PWF - ? -
37 PsiBlast_CBE 79.6343% 3 - C1 -4GIA 2.9 ?
48 PsiBlast_CBE 79.6043% 3 - C1 -2PWF - ? -
108 HHSearch 79.5643% 5 - C1 -2PWE - ? -
1 PsiBlast_PDB 79.5646% 10 - C1 -1UOK - O16G_BACCE -
57 PsiBlast_CBE 79.4842% -5 * C1 *4AIE 3.3 ?
43 PsiBlast_CBE 79.4743% 5 - C1 -4GI6 2.7 ?
101 HHSearch 79.4644% 4 - C1 -5DO8 - ? -
66 PsiBlast_CBE 79.4540% -9 - C1 -2ZIC 3.5 DEXB_STRMU
14 PsiBlast_PDB 79.2844% -3 - C1 -4GIN 4.0 ?
17 PsiBlast_PDB 79.2044% 4 - C1 -1ZJA 3.0 ?
39 PsiBlast_CBE 79.1843% 3 - C1 -4GI9 2.9 ?
30 PsiBlast_CBE 79.1844% 3 - C1 -1ZJA 3.3 ?
24 PsiBlast_CBE 79.0444% 5 - C1 -4GO8 3.1 ?
15 PsiBlast_PDB 79.0244% 4 - C1 -2PWG 3.5 ?
41 PsiBlast_CBE 79.0143% 4 - C1 -4GI8 3.0 ?
56 PsiBlast_CBE 78.9143% 1 - C1 -4H7V 4.7 ?
44 PsiBlast_CBE 78.8843% 4 - C1 -4GI6 3.9 ?
36 PsiBlast_CBE 78.8443% 2 - C1 -4GO9 3.2 ?
32 PsiBlast_CBE 78.8444% -4 - C1 -4H2C 3.9 ?
35 PsiBlast_CBE 78.6443% 2 - C1 -4GO9 3.3 ?
55 PsiBlast_CBE 78.6143% -2 - C1 -4H7V 3.3 ?
105 HHSearch 78.5943% 5 - C1 -1ZJA 3.0 ?
42 PsiBlast_CBE 78.4843% 4 - C1 -4GI8 4.2 ?
29 PsiBlast_CBE 78.4644% 2 - C1 -1ZJB 3.1 ?
31 PsiBlast_CBE 78.4542% 12 - C1 -4M8U 3.6 O16G1_BACSU
6 PsiBlast_PDB 78.3642% 14 - C1 -4HP5 5.0 ?
51 PsiBlast_CBE 78.3543% -1 - C1 -4HA1 4.2 ?
9 PsiBlast_PDB 78.2842% 18 - C1 -3GBE 3.3 ?
40 PsiBlast_CBE 78.2743% 4 - C1 -4GI9 3.8 ?
28 PsiBlast_CBE 78.2344% 3 - C1 -2PWD 3.9 ?
38 PsiBlast_CBE 78.1243% 4 - C1 -4GIA 3.0 ?
19 PsiBlast_PDB 78.0944% 5 - C1 -2PWD 3.9 ?
12 PsiBlast_PDB 77.9744% 4 - C1 -4GO8 3.2 ?
2 PsiBlast_PDB 77.8242% 17 - C1 -4HOW 3.2 ?
7 PsiBlast_PDB 77.7542% 15 - C1 -4HOZ 4.0 ?
109 HHSearch 77.7342% 17 - C1 -4M8U 3.6 O16G1_BACSU
18 PsiBlast_PDB 77.6244% 3 - C1 -1ZJB 3.1 ?
103 HHSearch 77.5042% 16 - C1 -4MB1 3.4 O16G1_BACSU
10 PsiBlast_PDB 77.2642% 15 - C1 -4MAZ 3.5 O16G1_BACSU
8 PsiBlast_PDB 77.1942% 18 - C1 -3GBD 3.4 ?
23 PsiBlast_CBE 77.0542% 16 - C1 -4M56 2.6 O16G1_BACSU
3 PsiBlast_PDB 76.8242% 19 - C1 -4HOX 3.5 ?
80 PsiBlast_CBE 70.0234% -12 - C1 -3WY3 4.0 ?
98 HHSearch 66.7235% 23 - C1 -3A4A 3.9 MALX3_YEAST
76 PsiBlast_CBE 66.5234% -5 - C1 -3WY2 3.7 ?
73 PsiBlast_CBE 65.9535% 27 - C1 -3AXI 3.6 MALX3_YEAST
75 PsiBlast_CBE 65.5634% -3 - C1 -3WY2 3.1 ?
110 HHSearch 64.9734% -11 - C1 -3WY2 3.7 ?
71 PsiBlast_CBE 64.6635% 28 - C1 -3A4A 3.9 MALX3_YEAST
74 PsiBlast_CBE 64.4435% 29 - C1 -3AXH 4.1 MALX3_YEAST
117 HHSearch 59.5630% -10 - C1 -5M99 3.3 ?