@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y3C8: (2018-02-04 )
MKKILTMKKVTKTFGSGHTKVSALKAIDFYVKEGEFVSIIGPSGSGKSTFLTISGGLQTPTSGEIVINGHSLTELPEKKRADLRFKEIGFILQSSNLIPFLTVKEQFELVDQVTSKKEDSTKIDSLLQSLDIQSLKNSYPKDLSGGERQRVAIARALYNEPSLILADEPTASLDTDHAYEVVKLLVKEAHEKQKATIMVTHDVRMIQWSDRVYRMEDGYLTEEEKKKE

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_A_5(5L22)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_B_3(5L22)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




59 PsiBlast_CBE 84.2932% -30 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 84.0540% -4 - C1 -3TIF 6.3 Y796_METJA
55 PsiBlast_CBE 83.7732% -31 - C1 -3TUZ - METN_ECOLI -
21 PsiBlast_CBE 83.7640% -1 - C1 -1L2T 6.7 Y796_METJA
53 PsiBlast_CBE 83.4032% -38 - C1 -3TUZ - METN_ECOLI -
131 Fugue 83.0132% -30 - C1 -3TUZ - METN_ECOLI -
56 PsiBlast_CBE 82.9232% -25 - C1 -3TUI - METN_ECOLI -
22 PsiBlast_CBE 82.7140% -6 - C1 -3TIF 6.3 Y796_METJA
57 PsiBlast_CBE 82.5732% -32 - C1 -3TUI - METN_ECOLI -
52 PsiBlast_CBE 82.4232% -28 - C1 -3TUZ - METN_ECOLI -
1 PsiBlast_PDB 81.9640% 2 - C1 -1L2T - Y796_METJA -
149 HHSearch 81.6431% -36 - C1 -3TUI - METN_ECOLI -
2 PsiBlast_PDB 81.5141% 10 - C1 -1F3O 5.9 Y796_METJA
54 PsiBlast_CBE 80.5632% -31 - C1 -3TUZ - METN_ECOLI -
58 PsiBlast_CBE 80.3732% -25 - C1 -3TUI - METN_ECOLI -
51 PsiBlast_CBE 79.5134% -22 - C1 -4U00 6.1 ?
7 PsiBlast_PDB 78.3636% 0 - C- -5NIL - ? -
6 PsiBlast_PDB 78.3636% 0 - C- -5NIK - ? -
143 HHSearch 76.7531% -36 - C1 -3DHW - METN_ECOLI -
130 Fugue 76.3533% -16 - C1 -1Z47 - ? -
8 PsiBlast_PDB 75.9736% -5 - C1 -2OLJ 6.0 ?
36 PsiBlast_CBE 75.2337% -24 - C1 -4YMV 5.0 ?
24 PsiBlast_CBE 75.2236% 3 - C1 -3C4J 4.9 ?
29 PsiBlast_CBE 74.8136% 8 - C1 -2OLK 5.9 ?
31 PsiBlast_CBE 73.2836% 3 - C1 -2OLK 5.8 ?
12 PsiBlast_PDB 73.1736% 2 - C1 -3C4J 6.6 ?
25 PsiBlast_CBE 73.0936% 0 - C1 -2Q0H 5.7 ?
30 PsiBlast_CBE 72.9336% 0 - C1 -2OLK 6.0 ?
32 PsiBlast_CBE 72.9036% 1 - C1 -2OLJ 5.8 ?
14 PsiBlast_PDB 72.8936% 6 - C1 -3C41 6.6 ?
19 PsiBlast_PDB 72.1437% -23 - C1 -4YMV 5.1 ?
34 PsiBlast_CBE 71.6136% -1 - C1 -3C41 5.9 ?
11 PsiBlast_PDB 71.5236% 3 - C1 -2Q0H 5.4 ?
18 PsiBlast_PDB 71.4937% -18 - C1 -4YMU 6.2 ?
37 PsiBlast_CBE 71.0937% -20 - C1 -4YMU 6.1 ?
9 PsiBlast_PDB 70.9936% 3 - C1 -2OLK 5.7 ?
127 PsiBlast_CBE 61.1834% 7 - C1 -1B0U 6.1 HISP_SALTY
108 PsiBlast_CBE 57.1832% -30 - C1 -5L22 5.0 ?
109 PsiBlast_CBE 55.0332% -28 - C1 -5L22 2.6 ?
115 PsiBlast_CBE 48.8631% 7 - C1 -2FGJ 5.2 HLYBP_ECOLX
116 PsiBlast_CBE 47.7631% 2 - C1 -2FFA 4.2
100 PsiBlast_CBE 47.7231% -1 - C1 -2FF7 4.2
120 PsiBlast_CBE 46.8531% 9 - C1 -1XEF 4.7 HLYBP_ECOLX
106 PsiBlast_CBE 46.1831% 10 - C1 -2FGK 5.4 HLYBP_ECOLX
99 PsiBlast_CBE 45.9831% -0 - C1 -2PMK 4.4
118 PsiBlast_CBE 45.2231% 18 - C1 -1XEF 5.4 HLYBP_ECOLX
114 PsiBlast_CBE 44.6331% 9 - C1 -2FGJ 5.4 HLYBP_ECOLX
119 PsiBlast_CBE 44.5131% 11 - C1 -1XEF 5.1 HLYBP_ECOLX
104 PsiBlast_CBE 44.5131% 11 - C1 -2FGK 4.9 HLYBP_ECOLX
117 PsiBlast_CBE 44.5031% 11 - C1 -1XEF 4.8
105 PsiBlast_CBE 44.0431% 6 - C1 -2FGK 5.2 HLYBP_ECOLX
112 PsiBlast_CBE 43.8531% 17 - C1 -2FGJ 4.5
103 PsiBlast_CBE 43.8431% 5 - C1 -2FGK 5.0