@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y3J2: (2018-02-05 )
MSILKTFLQKNKGLALLTFVMICLQIAGTLGVPKLVAKLIDTGIASGEASVIKKIGVEMLLVAFLGTIAAVASSYFSALASARFGFQTREKYFRKFQQLSMKDISRFSSGSLLTRMTNDVDNVQQMIVLFCQMILPAPVICVFTILMMFRYSLLLTWVTLISVVFYVWIVYRLMKRGAPLSLSIQPKMDRITITLREFFTGINMIRAFDNQSYEEKRTNKSFADYANQMIKVNRIFAWVTPIAFLLMGIVYASILWFGGNLVAEGALQIGVVTAVVEYSMLTLAYLMIAAMVLVIIPKSFASLRRIEEILQAEIEIEEETIKTVAEPTFDQTNAAAFEHVTFKYTEISDPVLEDIDFTIPKGKTTAIVGGTGSGKSSLAKLLLRLSDPTIGKVTLGGIPLTQMTQEQIRSHISYVPQKAFLFSGTILSNLQMGNEYASTEELSKAIKIAQLEELVDTLPDGLDSFVAQGGSNYSGGQKQRICIARALIKPAEIYVFDDSFSALDYKTDAALRAALHKHMSEKTLVIVAQRLSTIQQADNIIVLDEGKIVGQGTHEELLSNCQTYQEFAKSQGI

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_H_8(2FGK)

[Raw transfer]




ANP_A_3(4Q4A)
?
[Raw transfer]




ATP_A_5(2BBT)
CFTR_HUMAN
[Raw transfer]




ANP_A_3(3QF4)
?
[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_A_5(5L22)
?
[Raw transfer]




ADP_B_3(5L22)
?
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




111 HHSearch 84.8835% - - C2 -4Q4H - ? -
3 PsiBlast_PDB 84.3935% - - C2 -4Q4H - ? -
2 PsiBlast_PDB 80.7035% -60 - C2 -4Q4A 5.7 ?
1 PsiBlast_PDB 79.3835% -63 * C2 *3QF4 6.4 ?
112 HHSearch 76.0427%-142 - C2 -3QF4 - Y288_THEMA -
4 PsiBlast_PDB 75.9535% -46 - C2 -4Q4J - ? -
110 HHSearch 75.0526%-140 - C2 -5MKK - ? -
20 PsiBlast_PDB 70.5029% 0 - C- -4KSB - MDR1A_MOUSE -
103 HHSearch 69.3427% -86 - C2 -3B60 - MSBA_SALTY -
5 PsiBlast_PDB 69.2126% - - C2 -3B5X - MSBA_VIBCH -
10 PsiBlast_PDB 68.5230% - - C2 -3B5Z 2.3 MSBA_SALTY
9 PsiBlast_PDB 68.4930% - - C2 -3B5Y - MSBA_SALTY -
109 HHSearch 68.4827% -49 - C2 -4A82 - Y1866_STAAM -
8 PsiBlast_PDB 68.2427% -29 - C2 -4A82 - Y1866_STAAM -
6 PsiBlast_PDB 67.8827% -26 - C2 -2HYD - Y1866_STAAM -
108 HHSearch 67.6126% - - C2 -3B5X - MSBA_VIBCH -
7 PsiBlast_PDB 67.4727% -27 - C2 -2ONJ - Y1866_STAAM -
113 HHSearch 67.4427% - - C2 -4Q4H - Y288_THEMA -
93 Fugue 65.3227% -40 - C2 -3B60 - MSBA_SALTY -
12 PsiBlast_PDB 65.1129% - - C2 -3B5W - MSBA_ECOLI -
87 PsiBlast_CBE 46.0931%-122 - C2 -2BBT 5.5 CFTR_HUMAN
68 PsiBlast_CBE 45.7335%-111 - C2 -5L22 5.0 ?
69 PsiBlast_CBE 43.9635%-102 - C2 -5L22 3.3 ?