@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y3J3: (2018-02-05 )
MEKKKTLNTRALIRFWKMIKPEHKYFYGLFLCSLFGNLLVVAMPLIMGIGIDDLLSEIRKTGIGQLSFSDIKQALLFPVLLLIGCSVLSSITSFIQERTMAALSEKITLRVRKEITKKFKTLPMSFFDNHQVGDIISRTTTGLNQLSQVLLTGINQFFTSVVTIAAAGLMLFYIESKLTLLVLLLIVGSSIVTTKIANKNKQISEQNQYELGVLNNRMEEILAGNLVVKTFNQQAHAEAAIHEVNKKQYNAFKRAQFMNFAIYPAIRFINQLAFIISAVFGAMLVLSGGVTIGFLQAYLQYINQISEPISTASYVINSIQSAMAAIDRIFEILDETDEIPDLPDARLLEQPKGKIAFKNVQFGYTSDKILMNQVDFSVKPKQTVAIVGPTGAGKTTLVNLLMRFYELNKGKIEFDGLDITKLSRGELRRSFGMVLQNTWLFEGTVADNIAYGKMDATREQIIEAAEIAQCDHFIRTLPDGYDTIISSENGTLSQGQQQLLTIARVILANPPVVILDEATSSVDTRTEALIQQAMEAVTKDRTSFVIAHRLSTIENADMILVMKNGDIVEKGTHSELLQSPTLYASLYNSQFQIA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

12D_A_2(3B5J)

[Raw transfer]



ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ADP_A_2(5DGX)

[Raw transfer]



ATP_A_2(3NH9)

[Raw transfer]



AGS_A_3(4S0F)
?
[Raw transfer]



ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]



ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]
3 PsiBlast_PDB 83.4639% - - C2 -4Q4H - Y288_THEMA -
113 HHSearch 83.3840% - - C2 -4Q4H - Y288_THEMA -
114 HHSearch 82.2740% -38 - C2 -3QF4 - Y288_THEMA -
1 PsiBlast_PDB 77.4239% -8 - C2 -3QF4 - Y288_THEMA -
2 PsiBlast_PDB 75.7639% -6 - C2 -4Q4A - Y288_THEMA -
4 PsiBlast_PDB 75.5538% -10 - C2 -4Q4J - Y288_THEMA -
28 PsiBlast_CBE 73.0432% - - C2 -3B5Z - MSBA_SALTY -
9 PsiBlast_PDB 73.0432% - - C2 -3B5Z 2.3 MSBA_SALTY
27 PsiBlast_CBE 73.0332% - - C2 -3B5Z 2.3 MSBA_SALTY
8 PsiBlast_PDB 72.9732% - - C2 -3B5Y - MSBA_SALTY -
31 PsiBlast_CBE 72.9532% - - C2 -3B5Y 1.9 MSBA_SALTY
30 PsiBlast_CBE 72.9532% - - C2 -3B5Y 1.9 MSBA_SALTY
26 PsiBlast_CBE 72.8932% - - C2 -3B5Z - MSBA_SALTY -
29 PsiBlast_CBE 72.8032% - - C2 -3B5Y - MSBA_SALTY -
104 HHSearch 72.2925% -73 - C2 -5MKK - ? -
111 HHSearch 72.2328% -45 - C2 -4MRP - ATM1_NOVAD -
110 HHSearch 71.9228% -43 - C2 -4MRS - ATM1_NOVAD -
115 HHSearch 71.5730% -35 - C2 -5MKK - ? -
91 Fugue 69.0931% -51 - C2 -3B60 - MSBA_SALTY -
112 HHSearch 67.5028% - - C2 -4Q4H - ? -
41 PsiBlast_CBE 54.9443%-132 - C2 -5DGX 6.7