@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y3K0: (2018-02-05 )
MTDLIKASKFFYHYLKRYKLSFFFIFITVIIATYLQVKAPQYIGEAFQELANYVGGLMQGVDDKSKFVSVIWKLLLFYVLASAANFIYSILFTQVVGKSTNRMRIGLFNKLEKLTIRFFDSHQDGEILSRFTSDLDNIQNSLNQALLQVITNAVLLVGILIMMFRQNVELAWATIASTPVAVLIAVLIIRKARKYVDLQQDEVGKLNGYMDEKISGQRVIITNGLQEETIEGFLEHNQSVREATFKGQAYSGLLFPMMQGMSLVNTAIVIFFGGWLALNGDLERSVALGLVVTFVQYSQQYYQPLMQISSGYSMIQLAITGARRLNEIFDEKDEVKPENGKAFDGVEKGLALQHVDFGYSPEKLVLKDVSINVDKGEMVALVGPTGSGKTTIMNLLNRFYDVNDGSVVIDGIDIRDYDLDALRRHVGIVLQESVLFSGTIKDNITFGKPDASDEEVINAAKQANIHDFIMTLEKGYDTEISEENNLFSTGQKQLISIARTIITNPSLLILDEATSNVDTVTEARIQKAMDEAIKGRTSFVIAHRLKTILNADRIVVLRDGEVIEEGSHHELLAENGFYAELYHNQFVFE

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ATP_D_15(2IXF)

[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ATP_C_12(2IXF)
TAP1_RAT
[Raw transfer]



ATP_B_8(2IXF)
TAP1_RAT
[Raw transfer]



ADP_A_3(1JJ7)

[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ATP_A_5(2IXF)
TAP1_RAT
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ATP_A_2(3NH9)

[Raw transfer]



ATP_A_3(3VX4)
?
[Raw transfer]



AGS_A_3(4S0F)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]



ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]
155 HHSearch 85.1440%-141 - C2 -3QF4 - Y288_THEMA -
156 HHSearch 74.5640% - - C2 -4Q4H - Y288_THEMA -
9 PsiBlast_PDB 72.6032% - - C2 -3B5X - MSBA_VIBCH -
3 PsiBlast_PDB 72.3540% - - C2 -4Q4H - Y288_THEMA -
162 HHSearch 71.6234% -51 - C2 -5MKK - ? -
157 HHSearch 70.9131% - - C2 -4Q4H - ? -
2 PsiBlast_PDB 68.1940% -22 - C2 -4Q4A - Y288_THEMA -
150 HHSearch 68.1831% - - C2 -3B5X - MSBA_VIBCH -
1 PsiBlast_PDB 68.1040% -25 - C2 -3QF4 - Y288_THEMA -
4 PsiBlast_PDB 67.5340% -32 - C2 -4Q4J - Y288_THEMA -
135 Fugue 67.5030% -39 - C2 -3B60 - MSBA_SALTY -
14 PsiBlast_PDB 66.8031% 0 - C- -4F4C - PGP1_CAEEL -
149 HHSearch 66.7926% -66 - C2 -5MKK - ? -
145 HHSearch 66.5430% -40 - C2 -3B60 - MSBA_SALTY -
154 HHSearch 65.7133% -37 - C2 -4A82 - Y1866_STAAM -
147 HHSearch 64.3929% -34 - C2 -4AYX - ABCBA_HUMAN -
22 PsiBlast_CBE 64.0532% -10 - C2 -2HYD - Y1866_STAAM -
11 PsiBlast_PDB 63.9031% - - C2 -3B5Z 2.3 MSBA_SALTY
30 PsiBlast_CBE 63.8931% - - C2 -3B5Z 2.9 MSBA_SALTY
29 PsiBlast_CBE 63.8831% - - C2 -3B5Z 2.3 MSBA_SALTY
32 PsiBlast_CBE 63.7931% - - C2 -3B5Y 1.9 MSBA_SALTY
10 PsiBlast_PDB 63.7931% - - C2 -3B5Y 2.1 MSBA_SALTY
33 PsiBlast_CBE 63.7831% - - C2 -3B5Y 1.9 MSBA_SALTY
28 PsiBlast_CBE 63.2131% - - C2 -3B5Z 2.5 MSBA_SALTY
31 PsiBlast_CBE 63.1131% - - C2 -3B5Y 1.9 MSBA_SALTY
94 PsiBlast_CBE 33.3137% -5 - C2 -2IXF 7.2
95 PsiBlast_CBE 30.9737% 7 - C2 -2IXF 7.2 TAP1_RAT
96 PsiBlast_CBE 30.3937% 8 - C2 -2IXF 7.1 TAP1_RAT
97 PsiBlast_CBE 29.8037% 9 - C2 -2IXF 7.0 TAP1_RAT
101 PsiBlast_CBE 28.6436% 16 - C2 -1JJ7 6.1