@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y3K1: (2018-02-05 )
MKLILRHAKKYKVAVFISLLSVAVMVAAALWQPKLLQQVLEAIITEDNDEMKTIGIYLISLALLGLAAGVTNTIFSAKVAQGVSADIREEAFRKIQTFSFGNIEQFSAGNLVVRLTNDITQIQNLVMISLQSLFRIPFLFIGAFILAMITMPQLWWIIVALIVTVFLITALSFTRMGKHFMIIQKLIDRVNSIAKENLLGIRVVKSFVQEENQLKSFSKVSEDLTKHNIIVGTLFSVMIPSFMLAANLAVVGAIFFVSDLVKDDPTLIGGIASFMNYLMQIMMAIIIGGMMMMMTSRAAVSLKRIAEILDAEPDLTYLDVPEQELTGSVTFDHVSFRYPGEDTDTLKDISFSIKPGEMVGIVGATGAGKSTLAQLIPRLFDPTEGKVEVGGVDLRQVNEKSLRQTVSFVLQKAILFSGTIAQNLRQGKKNATEKEMEHASSIAQAKEFIEKLSDRYEAPIEERSSNFSGGQKQRLSITRGVIGNPKILILDDSTSALDARSEKLVREALDRDLKGTTTIVIAQKIASVVKADRILVLDEGRLVGEGTHEELVAGNRVYQEIFETQKGTEE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]



ANP_A_3(4Q4A)
?
[Raw transfer]



ADP_B_2(2FFB)

[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]



ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]
139 HHSearch 86.1540% - - C1 -4Q4H - ? -
4 PsiBlast_PDB 84.9440% - - C1 -4Q4H - ? -
3 PsiBlast_PDB 78.3940% -23 - C1 -4Q4A 5.9 ?
2 PsiBlast_PDB 77.4840% -26 - C1 -3QF4 - ? -
1 PsiBlast_PDB 75.7640% -27 - C1 -4Q4J - ? -
14 PsiBlast_PDB 73.6128% 0 - C- -4F4C - PGP1_CAEEL -
137 HHSearch 65.5628% -75 - C1 -5MKK - ? -
138 HHSearch 64.9128% -24 - C1 -4A82 - Y1866_STAAM -
145 HHSearch 64.4330% - - C1 -4Q4H - Y288_THEMA -
134 HHSearch 64.1927% - - C1 -3B5X - MSBA_VIBCH -
15 PsiBlast_PDB 63.9828% - - C1 -3B5X - MSBA_VIBCH -
132 HHSearch 61.7826% -28 - C1 -4AYX - ABCBA_HUMAN -
121 Fugue 61.2227% -25 - C1 -3B60 - MSBA_SALTY -
148 HHSearch 61.1729% -58 - C1 -5MKK - ? -
9 PsiBlast_PDB 60.6329% -56 - C1 -5MKK - ? -
144 HHSearch 59.9430% -32 - C1 -3QF4 - Y288_THEMA -
131 HHSearch 59.5727% -22 - C1 -3B60 - MSBA_SALTY -
133 HHSearch 59.1426% -30 - C1 -4AYT - ABCBA_HUMAN -
16 PsiBlast_PDB 58.5130% - - C1 -3B5W - MSBA_ECOLI -
18 PsiBlast_PDB 57.7130% - - C1 -3B5Z 2.3 MSBA_SALTY