Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAISTKELMEVTLGKKLGAGSFGSVFVGV-LPSGNFVAVKILELSDDAPSN---TEVEIHRKMVHPNIIRYLYSRIDLESTPKKLYVYLEFVTGGSVTSLMKSLPNGCLPYAVVRVYARHMFQGLEYLHSNQVAHRDIKGDNVLISMDTGTAKLADFDQAKIMNTHGTLRKAATATLAGTPYWMAPEVITDEDGYDPFKADIWSAGCTVAEMITGRAPWTPMPNVMHIMNKLALSTGWPDAVPKDAKELGSQDAYDFLDLCFQRDVSKRPPAATLLKHVFLRV
4ZJI Chain:A ((28-277))---------------EKIGQGASGTVYTAMDVATGQEVAIKQMNL-----KELIINEILVMRENKNPNIVNYLDSYL----VGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMD-GSVKLTDFG----FCAQITP------TMVGTPYWMAPEVVT-RKAYGP-KVDIWSLGIMAIEMIEGEPPYLN-ENPLRALYLIA-TNGTPEL--QNPEKL-SAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI


General information:
TITO was launched using:
RESULT:

Template: 4ZJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1135 -40768 -35.92 -173.48
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -35.92
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_4ZJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZJI-query.scw
PDB file : Tito_Scwrl_4ZJI.pdb: