Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceDPKNCKFNVLNGSGINVANGCCDVTKKQVTVSPFTVSCTESC--GLAIVSGGDPTFSLQNAGRC
5FJ8 Chain:B ((772-825))--------VLNKSSIDRGFGRCETRRKTTTVLKRYANHTQDIIGGMRVDENGDPIWQHQSLG--


General information:
TITO was launched using:
RESULT:

Template: 5FJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 43 1969 45.78 37.86
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : 45.78
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.324

(partial model without unconserved sides chains):
PDB file : Tito_5FJ8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FJ8-query.scw
PDB file : Tito_Scwrl_5FJ8.pdb: