Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILEIMMKVKNIQSETAMKQHSESVVSNQFEPTCHSEHSSVSDVCSSSAFGLATRSSRARMKRASGFTLIEVMVVIVILGVLAALIVPNVMGRSEKAKIDTTQITLKGVAGALDQYKLDNGHFPTMQEGGLDALINQPA---TAKNWMPGGYVKGGYPKDSWKNDIQYVVPGKDDHPFDLYSFGADGKEGGEGNDADIYYQP
2KEP Chain:A ((39-143))------------------------------------------------------------------------------------------MSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQG-LEALVKKPTGNPQPKNWNKDGYLKK-LPVDPWGNPYQYLAPGTK-GPFDLYSLGADGKEGGSDNDADI----


General information:
TITO was launched using:
RESULT:

Template: 2KEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 391 23842 60.98 233.75
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 60.98
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2KEP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KEP-query.scw
PDB file : Tito_Scwrl_2KEP.pdb: