Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQHQSLFNKSQWTQLVKHFSAVAVLGLTIAAPAWAIDPTAKELRIGFQKSSINFAIAKQQKLFEQEFPNAKITWNEFPAGPQILEALAVGSLDVGVTGDTPPVYAQAAGKPLYYIAYEAAKPLASAILVPKNSQLKQLKDIKGKRIALQKGSSSHYLLVQAVRKAGLKWSDITPIWLTPADARAAFQKGAVDAWAIWDPYYASAQLEDQARVLVSGKGLSPNYTFYLAAPNFVKQYPKAVPGLIKQINQADKWVQSYQVETASAIGQSTGLKPATSDLFIKRRPRPSSAAPLNSKVIAEQQQIADIFTQQGIIPKPISIKQAVWGAK
2X26 Chain:A ((5-285))------------------------------------------LRIGYQKGSIGMVLAKSHQLLEKRYPESKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPYAEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRP-PTTIKPVNAEVAALQQQTADLFYENRLVPKKVDIRQRIW---


General information:
TITO was launched using:
RESULT:

Template: 2X26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1528 -159662 -104.49 -568.19
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -104.49
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_2X26.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2X26-query.scw
PDB file : Tito_Scwrl_2X26.pdb: