Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQELANRLAIQNFVNAYMQETGKGYLLSFDQQSSTQQAFSSGSTLLTLPLPSIQAECSVPLSYVSRVGRHRLAALPKMCIDGQWQKFSAGTIVSLLLEELVIESQFKLDAAS---LLEKWIQSRDALLQFLKQRHNDFDDLVKAGQNFIESEQALILGHSMHPAPKSRNGFVHEDWLKFSPEHAGKTQLHYWLVHQNYIAEGCATEQPISDQVKDAIRWCLSESDLNLLKTHVEFK-LLPLHPWQARYLQGKPWFEQLKQTGQLIDIGLRGWQFSPTTPIRTLASFNAPWMVKTSLSVMITNSIRVNLAKECHRGEISYRLWHSDLGKKILKQCPTLKAVNDPAWIALQ-IDGEIINETICIFR-----DQPFAVQQQVTCIASLCQDHPNKELNRFNALFDQIAQKNQQTNFKEIALDWFDHFLKIGLAPLMYVYHKYGMAFESHQQNVLLELEDGFPKNLWLRDNQGFHYIEEFATEIVEALPDLLEKAHA--VGPKDFVDERFSYYFFGNTLFGLINAIGATGYISEDELLIHLQQNLLQLLEQYPDSTLLQGLLFNDSLPYKGNLLTRLHELDELIAPLEHQSVYVQLPNPLYVEQKDVSYA
5JM7 Chain:A ((14-573))-------VAAQCFLNSLVRETKDWRLTEYQ------------PTQLIIPLGEQQA-LHFRVAYFSPTQHHRFEFPARLVTASGSHPVDFATLSRLIVDKL--QHQLLLPATSCETFHQRVMESHAHTQQAIDARH-DWAALREKALNFGEAEQALLVGHAFHPAPKSHEPFNQQEAERYLPDFAPHFPLRWFAVNKTQIAG-----ESLHLNLQQRLTRFAAENAPQLLNELSDNQWLFPLHPWQGEYLLQQEWCQELVAKGLIKDLGEAGAPWLPTTSSRSLYCATSRDMIKFSLS--------TLSVKEVKRGMRLARLAQTDDWQTLQARFPTFRVMQEDGWAGLRDLHGNIMQESLFALRENLLVDQP---QSQTNVLVSLTQAAPDGGDSLLVAAVKRLSDRLGITA-QQAAHAWVDAYCHQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGLIYRDCQGSAFMPHAAGWL-----DTIGEAQAENVFTREQLLRYFPYYLLVNSTFAVTAALGAAGLDSEANLMARVRTLLAEMRDQVTHKTCLNYVLENPYWNVKGNFFCYLND-----DP---SVIYFDFANPLLA--------


General information:
TITO was launched using:
RESULT:

Template: 5JM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2932 -61514 -20.98 -115.41
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -20.98
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_5JM7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JM7-query.scw
PDB file : Tito_Scwrl_5JM7.pdb: