Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNISYELEKKIVNLNALYNEEEAELSLRLSQNIRKNQQDGYVYSLISRGFEIKGLKLWLVDKNIDQLKQWFYVSSVLRAESCKYSSGYTLSTPDEFIFPLLSDNTEIINKFAYLDTVNLLWGEFEPSYQEAKFKP-SKDDPRFRTHALQAVLRNDWEDYKKIKEVANQKINKLREVVQFEFGIYDAIYEKDKDKIIEIVQTLLNPRVHKTYNKDFGEEFNGEIWSHHPVMFTKLAWMNGLEIEIDNPLVPMELMPIKPLEHYDYHYDFLDPNWKPKSLFEKLFGKKRNK
5FXD Chain:A ((362-486))---------------------------------------------------------------------------------------------------VLQDRHKINNGIPSLDELQLL--DWVPNGGHIGFSPVSAPDGREAMKQFEMV-RNRANEYNK--DYAAQFIIGLREMHHVCLFIYDTAIPEAREEILQMTKVLVREAAEAGY---------GEYRTHNALMDDVMATFN---------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 466 -4552 -9.77 -36.71
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -9.77
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.315

(partial model without unconserved sides chains):
PDB file : Tito_5FXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FXD-query.scw
PDB file : Tito_Scwrl_5FXD.pdb: