Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLVEKLRRKIMQSKTLFLLGLCTIFSTTVSALPLDSKGAKQRLSQAAKQKVFQGKIDLDALVSNDSNDLIVEYNIPSSSVSSGLERRSYIATNKKNLQTRFSRAGGVQVLRDYNNLPLAFYRISNREALIALLNDPNVKAVYPNRINRTTTTESLPLINQPQANTNGFTGEGSSVAVLDTGVNYLHSDFGCTAVNTPSSTCRVVYSFDSAPDDGTLDDDGHGSNVSAIVSK----VATKTKIIGIDVFRKVRSQGKWVSTAYDSDILAGINWAVNNAQTYNIKAVNLSLGVPGVKYTSECSDSSYGTAFANARAAGVVPVVASGNDAFPDGISSPACVAGAVRVGAVYDSNIGGVSWGNPVKCSDPTTAADKVACFSNGGSLVTLLAPGAMITAGGYT-------MGGTSQATPHVAGAIAL-LRAN-SVSPTESIDQTISRLKATGKPITDSRTGLVFPRIDLLAATNGLTVN
2B6N Chain:A ((16-268))--------------------------------------------------------------------------------------------------------------------------------------------------------RNLPLDNNYHTD---YDGSGVTAFVIDTGVLNTHNEFGGRASSG--------YDFIDNDYDAT-DCNGHGTHVAGTIGGSTYGVAKNVNVVGVRVLNCSGS-------GSNSGVIAGINWVKNNASGPAV--ANMSLGGGASQATDD--------AVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGS--------------------TTSNDSRSSFSNYGTCLDIYAPGSSITSSWYTSNSATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTN--LLKTRATADKVTDAKTG------------------


General information:
TITO was launched using:
RESULT:

Template: 2B6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1623 859 0.53 3.58
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 0.53
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_2B6N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B6N-query.scw
PDB file : Tito_Scwrl_2B6N.pdb: