Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNALTQELVELLTLEKLEENIYRGISRNLVGKRVFGGQVLGQALRAASYTT--DRPAHSLHAYFLYGGDINAPIIYEVDRLRDGKSFVSRQVRAIQHGRVIFSAMVSFANPEEGLNYQHPEPDYPAPEALKSESELKEGILNFVPENVRASFMRERHVEIRPIDPVNPFQPQPEAPFNAHYIRTHDRIPKQLEDISLHQAIVAFYSDFTLMTTALRPHGLSYISPSLQCASIDHAIYFHRPLRADEWMLYDMEATVSAASRGLNFGRMW-QNGQLVCSTVQEGLMRLREIETQ
4QFW Chain:A ((17-284))----------------IEEGIFRGQSE-----QVFGGQVVGQAIYAAKQTVPAERTVHSFHSYFLRPGDSSKPIIYDVETLRDGNSFSARRVSAIQNGKPIFYMTASFQSQEEGFEHQNTMPDVPPPEGLMSETDIARQ--------------GPQPIEMRPVKFHNPLQGSVEEPNRYVWFRANGKMP---DDLRVHQYLLGYASDFNFLPTALQPHGIGFLEPGMQIATIDHSMWFHRPFRLDDWLLYAVESTSASGARGFVRGQIYNREGVLVASTVQEGVIRL------


General information:
TITO was launched using:
RESULT:

Template: 4QFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1272 -31514 -24.77 -128.10
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -24.77
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4QFW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QFW-query.scw
PDB file : Tito_Scwrl_4QFW.pdb: