Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMQDTVADMLTRVRNAQMAKKQTVSMPSSKLKVAIANVLQQEGYISNVEVAQEETKSTLTITLKYFEGKPVIEMVKRVSRPGLRQYRGKDKLPSVKQGLGIAIVSTSKGIMTDRAARAAGIGGEVIAFVS
5ME0 Chain:H ((2-130))-SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKV-EGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA


General information:
TITO was launched using:
RESULT:

Template: 5ME0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 596 -72761 -122.08 -564.04
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain H : 0.93

3D Compatibility (PKB) : -122.08
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.93
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_5ME0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ME0-query.scw
PDB file : Tito_Scwrl_5ME0.pdb: