Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRILTIGQKMPAWVLTGFEDYFKRIQPFVQTQVIKLPMAKRGKNDSEADILKYCQIEGESILNALKPNETLIALEVGGRELSTEKLADTMKQWMLEGNDVALAIGGPDGLSDQVRKAAAWHWSLSKLTMPHPLVRILLIEQLYRAMSINHNHPYHRA
5TWJ Chain:C ((8-161))VKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKN---ADIKRILDKEGEQMLAAAGKNR-IVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLIGGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHR-


General information:
TITO was launched using:
RESULT:

Template: 5TWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 717 -90560 -126.30 -588.05
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain C : 0.86

3D Compatibility (PKB) : -126.30
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_5TWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TWJ-query.scw
PDB file : Tito_Scwrl_5TWJ.pdb: