Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCRQITSFYSNDITNKTKVELDMSDTVIRDFFVSLGFSTDNEGARKMVDTLKGVELKAALLHKTLLLLATGAVVAVTKTASELDKLYYSSQRIGASASNIRAYGDAISQMGGNAQNALQSLENVAQKMRNSPGYEGMLTGMGVATRDGNGQLRDRVEVMKDLSKTMKGMDYYQANAYASSLGIDENTLMAMRDDKFIDNMEKYQKLRQSVGLTDELTKSGTDFMVEFRDITMTTKAITEVVVMTAGQVLIPVLKVINNFLRSAIAWFAELDPRFKAILATGLKFALLAIIFGGFIGTIAKLASVLPMLKSLLFLIKSLRLAFLASPIGIVLALAAAIAALWDDYQTWKNGGESLIDWSKWENGIETAISRIKQLAELIKSLKDKTVEFVTKAIDDPAGTAKETVAAVTEAAKTGTAAVVSATKSTVSTIKNNIASSTGFSQKYKSKNFTSDKAKTIEAVAKRIGVDPNDLAAVISFETSGTFSPSAKNPKSSATGLIQFMAGSGGTKGKYYGMSRKKFASLSFDEQMVYVEKYFKERGFKSSKKRDVADLYTAVTGYGYKKGSEAYELNKVWDSN--KDGYIAKGEMVQNTSFKKHQRNYFTPNITSAPKVNISNTKNLANVGNPHKEQVNKSNASSANITIYQSHNTEMTINGADNPKETAQVVQRHNENTMIQMARNVKPLIG
1MEM Chain:A ((73-194))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIP----EGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYI-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 332 -8876 -26.73 -73.97
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -26.73
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.147

(partial model without unconserved sides chains):
PDB file : Tito_1MEM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MEM-query.scw
PDB file : Tito_Scwrl_1MEM.pdb: