Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIAIIGAGISGLMSALELVEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAVNQLAQFGKASYQAWNQKLYPVTGIDFEIHDTGM--LIFDEEDFDVGLSYAEQHQEPIQRCEYLQRDALEQVNPHISEQFQEAIYFPELSNIRNPRVLQSLISYLKQHPNVEFFEHAAVKKLIQQGDVIQALQTEDGRKHTADHFVITSGAWSHYWNSQLKLEIPVEPVQGQMLLFKTPAHWLPTMCMNRVMYLIPRMDGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELADFPIVHRWAGLRPSSPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPTLVDAKAYSPERLQNKILA
3IF9 Chain:A ((36-362))------------------LAKENKNTALFESGTMGGRTTSAAAGMLSAHRECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDV-----LQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKM-LGAEIFEHTPVLHVERDGEAL-FIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTKTLYHDACYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMNK--------------------


General information:
TITO was launched using:
RESULT:

Template: 3IF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1725 -6182 -3.58 -19.02
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -3.58
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_3IF9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IF9-query.scw
PDB file : Tito_Scwrl_3IF9.pdb: