Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNGMEEHLLTQKLQQRLRFSTHIQEAQAAVLIAITNENNPKVLLTRRSIHMNNHAGEVSFPGGKRDPSDTSNIVVALREAQEETALNPFDVQLLGDLPMQRARSGLSVKPIVGLIP----------PEVTLIPQPTEIDRIFFVPLQQLIEMRPTPYEVRYAHQSLY-FPSLQIDNEIIWGLTAQMLIALFKYGLGYQKEWPFLLNAPTFGMPKFSHKK
1NQY Chain:A ((35-190))--------------------------RAAVLVALTREADPRVLLTVRS------KGQIAFPGGSLDAGETPT-QAALREAQEEVALDPAAVTLLGELDDVFTPVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPT-LAELRAVPLVRERRTLPDGTEV-----PLYRYPWRGLD---IWGMTARVLHDLLE---------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 607 -45651 -75.21 -328.42
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -75.21
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_1NQY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NQY-query.scw
PDB file : Tito_Scwrl_1NQY.pdb: