Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGGELDDQNKDAPDDGNAARKRACLEHVLPSMQQRFAELAHASVGESSLTVEALFQRYQRVLKVGEGTFGEVFVLYDTVAHTYITMKRMHTLLSLRRRSLGIHRCTFREVELLAALQHPNIVQVLDYHILSDGSLVMLMPVIAHDLTSLLRRWPATPQSSGHGTASTAASMRPRMPLHVVKCIFRQIIAGIAYLHKHKVVHRDLKPSNVMVDHTGVVKLIDFGWSR-FCAAAGAMTGPPCVTAFRPPEVLVGAHNHYTFSLDIWCCGCILFEMLTGGTPFAKSRNEAECLANIVDWLGSP-----PSSSEVYYRCAARCTFPLAPGRP--DTFAQRCNNYGIKSAEAMFLRRMLCLEPGERATAEALLRDPWFTTAPTMCVPRAIPLPAHNMFRLVEVKRKELEH
2QKR Chain:A ((15-304))-------------------------------------------------YFQGLMEKY--LEKVGEG---VVYKAKDSQ-RI-VALKRI--------------STAIREISLLKELHHPNIVSLIDV-IHSE-CLTLVFEFMEKDLKKVLDENKTGLQDSQ------------------IKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD-ALKLADFGLARAFGIPVR-----VVTLWYRAPDVLMGS-KKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL--PLWKQRTFQVFEKKPWSSIIPGFCQE-GID-----LLSNMLCFDPNKRISARDAMNHPYF--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2QKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1235 -141286 -114.40 -545.50
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -114.40
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_2QKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QKR-query.scw
PDB file : Tito_Scwrl_2QKR.pdb: