Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequencePSDGPEAPEELCFTTIIRRRDGFKYAEKGPIGQKIAFLAGLNCTVQKGCKLACTPAHYGLKYKVSCRPA
4GK9 Chain:A ((197-239))------------------------YAGEGPIGFKGNSVAGNNYAVENQWGGTSAPWHPGGIWLLGCR--


General information:
TITO was launched using:
RESULT:

Template: 4GK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 112 -2075 -18.53 -48.26
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -18.53
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_4GK9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GK9-query.scw
PDB file : Tito_Scwrl_4GK9.pdb: