Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceWYWGPMNWEDAEMKLKGKPDGSFLVRDSSDPRYILSLSFRSQGITHHTRMEHYRGTFSLWCHPKFEDRCQSV
2VIF Chain:A ((26-97))WYWGPITRWEAEGKLANVPDGSFLVRDSSDDRYLLSLSFRSHGKTLHTRIEHSNGRFSFYEQPDVEGHTSIV


General information:
TITO was launched using:
RESULT:

Template: 2VIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 247 -13998 -56.67 -194.42
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -56.67
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_2VIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VIF-query.scw
PDB file : Tito_Scwrl_2VIF.pdb: