Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKTFLKDKEKIVNALQLPYSNAKLEATNNLIKLIKHNAFGFRNFENFKKERTKFVLSRSSLSSTHYS
5GJQ Chain:S ((295-326))------------IKAIQLEYSEARRTMTNALRKAPQHTAVGFKQ------------------------


General information:
TITO was launched using:
RESULT:

Template: 5GJQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 32 1898 59.30 59.30
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain S : 0.68

3D Compatibility (PKB) : 59.30
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_5GJQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GJQ-query.scw
PDB file : Tito_Scwrl_5GJQ.pdb: