Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSFLSKNGAGILACLLISILSWYLGGFFPVIGAPVFAIFIGMLLHPFLSSYKQLDAGLTFSSKKLLQYAVVLLGFGLNISQVFAVGQSSLPVILSTISIALIIAYLFQRFFALDTKLATLVGVGSSICGGSAIAATAPVIHAKEKEVAQAISVIFFFNVLAALIFPTLGTWLHLSNEGFALFAGTAVND---TSSVTAAASAWDSLYQSNTLESATIVKLTRTLAIIPITLFLSYWQSRQQENKQSLQLKKVFPLFILYFILASLLTTLLTSLGVSSSFFTPLKQLSKFLIVMAMSAIGLKTNLVAMVKSSGKSILLGAICWIAIILTTLGMQTLIGIF
2YVQ Chain:A ((1375-1432))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------LGVAEQLHNEGFKLFATEATSDWLNANNVPATPVAWPSQE-----LS-SIRKLIRDGSI-----------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 138 -4634 -33.58 -92.68
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.40

3D Compatibility (PKB) : -33.58
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.40
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_2YVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YVQ-query.scw
PDB file : Tito_Scwrl_2YVQ.pdb: