Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFVNFFHEKEKIMRYDFGKVYKEIRESKGLTQEEVCGGVLSRTSLSKIESGKTTPKYENMEFLLRQINMSFEEFEYICQLYQPSQRTEIMQTYLNMRSIIGTSDLVNLFQKCQDYLKTHHDLPIEEIRDMLEVVIYLRQHGAGELSKHAEQVVKKLWKKIEKQDTWYESDLKILNTILFSFPIEYLHLITGKILQRLEVYKNYQHLYDLRMTILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAICYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVEIYYQAKER
4RYK Chain:A ((10-100))----------------YGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITLSLFEEILKRIMVPLDEFFFI---YRDFSSTEDDSFWIDFVELSGKNDVVG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 240 -39052 -162.72 -443.77
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -162.72
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4RYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RYK-query.scw
PDB file : Tito_Scwrl_4RYK.pdb: