Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGILVYGGVQLIGLTANHEMRIFILIILTSLVFMSMVTTLATWNSRIGAFFSLILLLLQLASSAGTYPLALTNDFFRSINPWLPMSYSVSGLRQTISINKSFS
4ZIC Chain:D ((164-223))------------------------MLVCNSNCAVVGLVVPAKALIQKFGPIESVSMVTMQAVSGAG-YPGVSSMDIFDNIVPYIP-------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 79 -15717 -198.95 -261.95
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain D : 0.62

3D Compatibility (PKB) : -198.95
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.104

(partial model without unconserved sides chains):
PDB file : Tito_4ZIC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZIC-query.scw
PDB file : Tito_Scwrl_4ZIC.pdb: