Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLTLVRHGEAAPPVNGNDIKRPLTARGHAQAEQTATFLKD-IVKPNIFVVSPLLRAQETLAHIQTYF---KDVPVLLCDKIKPDDDAKEAIEWLSQIPYE---SIVVVCHMNVVGH-IAELLTHETFNPFALAEARIYDQAVIANGLSTQKNSFIPTI
1UJB Chain:A ((1-124))MQVFIMRHGDAALDA-ASDSVRPLTTNGCDESRLMANWLKGQKVEIERVLVSPFLRAEQTLEEVGDCLNLPSSAEVL--PELTPCGDVGLVSAYLQALTNEGVASVLVISHLPLVGYLVAELCPGET--------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UJB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 526 -15122 -28.75 -130.36
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -28.75
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_1UJB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UJB-query.scw
PDB file : Tito_Scwrl_1UJB.pdb: