Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYIWMPETNGVWHWSNGENWLQAASLDQLIQDLQIHQGKEAAVFFPSRHAQMLQQTMAKFHYKQLGADGVKYLLEEFVTLPID--HMKVVHHFHADQLTVLAVAQGMVETWQHSLALLPTKLVALLPDFLVLP-EPQAQQVILCNIGHQLLVRENKWLGNSIDDLGLFLEFQS-AETHYQYSGLTAEQLESLEAASSAEQRSEFVYQFQPLDKTKQHPFNVLPKSKGQERTFSNYWKACAAVVLAIIVVQFSYDLLRWVKLKKVADQTAEQAIEQYKYWFGSSSGRVTEQNVRSNFKSRLEVSQQGDTQALSLLSRVGPILMQRQILAQQLNYDASILTMALKTKSADDLQALTQQLNQQGFKAELGNVQADGSGAIGVVKIQ
5TKW Chain:A ((86-191))----------------------------------------------------------------------APFLLEEQLADDVEATHFALLHRQQA-QCEIVAVQRQKMRDWLARCESLSLQPLALTPDVLALPWQPPAWSAV--QVDEQWLIRHQPWGGMAAENVWLTELLQSEAEEH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 299 -8264 -27.64 -81.02
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -27.64
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.210

(partial model without unconserved sides chains):
PDB file : Tito_5TKW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TKW-query.scw
PDB file : Tito_Scwrl_5TKW.pdb: