Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTANIMTTLKNQITDALKTSMRAKDMATVTVLRSLQAAIKQIEVD-ERIELDDAQVLAVIEKQIKQRKESIKAFEGAGRDDLASKEQAEAEVLSQFLPEAMTEEELDSLIEQTIAAQEATSMKDMGKVMNSLRPIIAGRADPAQVSAKIKAKLA
1NG6 Chain:A ((2-148))-------SLLERLNQDMKLYMKNREKDKLTVVRMVKASLQNEAIKLKKDSLTEDEELTVLSRELKQRKDSLQEFSNANRLDLVDKVQKELDILEVYLPEQLSEEELRTIVNETIAEVGASSKADMGKVMGAIMPKVKGKADGSLINKLVSSQLS


General information:
TITO was launched using:
RESULT:

Template: 1NG6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 468 12003 25.65 82.21
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 25.65
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.711

(partial model without unconserved sides chains):
PDB file : Tito_1NG6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NG6-query.scw
PDB file : Tito_Scwrl_1NG6.pdb: