Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQYSMRFWKNKYFLLIMLCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNISKSSHSNSSKISQTKNFNDSTGQIHLNQANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
2DUY Chain:A ((11-73))-------------------------------------------------------------------PLPQAQTPVSLNEASLEELMALPGIGPVLARRIVEGR----PYARVEDLLKVKGIGPATLERLRPYL--


General information:
TITO was launched using:
RESULT:

Template: 2DUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 210 -36950 -175.95 -586.51
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -175.95
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_2DUY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DUY-query.scw
PDB file : Tito_Scwrl_2DUY.pdb: