Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKFKLPLAIAIASAVLVGCSSNKVKEAKPNPLPKLTESNKSLVPVFSRSVSSTNKADPLRLQLDASEGVVFTLDPKGEVAAYRGKQRLWEKKVSKLGLSSG--VEAAEGIVVVGNSKGQLFALDQATGEQKWTAQLSGALLSPSLVQSGRVITIANDGTVFAHDVSSGQQVWAYKLPNVQFSLRGQPSPVSLDPRTVLIASANAYVYAIDTISGIPHFQRRVAVSEGRSDIQRLIDIDGDPVVAGQLMVTTSFQGQVTVTDLASQRVVWSEDSSSTKRPEVYDNKVFVSSTDGKLTAYDLTTGEQLWQNDSLLNRHLSNPVVLGSDLIVGDLDGVLHLIDPTTGKLIGRSKTSGEVNTLRVIEKQLYVSTRKGDLSIWQNR
4IMM Chain:B ((44-391))-----------------------------------------AVLTQVSSIRLDQ-------DLQIAPLADGMIAASRSGIVSGYMG-SIAWQYNAE-DVITGGVGIDDQGSVAVIGTRSGKLIALDARTGAARWVVELASSSLAPALISGDKVIVITNSGTIFGLDINSGATVWQYAT------VRGMAKPLALDARTVLIGGADGRIHALDTMTGAPVWTRRVGL---------LRDIDGTPTVVDHYLYAASYSGQLAGFDMTTGRTMFVSELSSTKKLTTLADAVIGSSTDGDVVAFNRMTGEKLWENHDLKYRGLTNPVTIGTYIAVGDADGVVHILN-HQGQIISRANTKGALTNLTVINNRLYAQSADGVVTVWQ--


General information:
TITO was launched using:
RESULT:

Template: 4IMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2027 -26522 -13.08 -84.73
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -13.08
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_4IMM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IMM-query.scw
PDB file : Tito_Scwrl_4IMM.pdb: