Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSMIDILQLEGVQPIDYRNEDGCIMITVQPSGEHLETCPECGGRLYKHGQRINHFADTPLQMQPVKIEVIRTRYRCSECKSMITSQLSFLDEKRRATHRLIQQVRKRCLDRTFTQLAEDTGVVVNTIKNITLDFVEELERDIKFETPTIMGIDELKLMGTYRCVITNLAMNSLYDMLPERTQDTLIPYFAKLPDAEKVEWICSDMWRPFKKSFRLHLPNAKLIIDKFHVVRMASEALDTERKALQSSLDRDARLNMKKHLRWILLRRPNSLTEDQQRILGNLEKWHPEFKEAYDLKEQFYNIYEATTKDDAIQRFHEWESSIPKYLKSFRDVAKTVNNNFEDIFTYWDAPIRITIAYTEGHNGITRVANRMGRGYTFEVLRAKMLYNKVARSITTLKTPSSSLKSTKGYEGLTAFPTKQEKTKFEYGAYIPTLVELYGGDEDLDEELT
4GJY Chain:A ((89-129))--------------------------------------------------------------------------------------------------------------------------------------------------------------------VGYLAQHQLFDQIPELKQDISIPDYCSLGDGEEEE-ITINAW--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 62 -9159 -147.72 -223.38
target 2D structure prediction score : 0.12
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -147.72
2D Compatibility (Sec. Struct. Predict.) : 0.12
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.307

(partial model without unconserved sides chains):
PDB file : Tito_4GJY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GJY-query.scw
PDB file : Tito_Scwrl_4GJY.pdb: