Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSGGFLVMCPFCGRSKGGLVCGYCGWVSKDKKFRFVVVKNG
1KJZ Chain:A ((60-80))---------CPNCGRYSTSPVCPYCG----------------


General information:
TITO was launched using:
RESULT:

Template: 1KJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 30 -4137 -137.88 -243.32
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -137.88
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 1.359

(partial model without unconserved sides chains):
PDB file : Tito_1KJZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KJZ-query.scw
PDB file : Tito_Scwrl_1KJZ.pdb: