Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNLTQLFNRFKANSILIYCLQILIVLTGTTLGLLWLGHNELIVPVTLGAIAAALTDFDDRLSLRLRNLLYVCLLFFTVSTILGFLAPYKFLFILYLSISSACFILLGALGQRYATISFGSILLSIYSMFGLGEYAHWYQQPTYFVYGALWYGLTSILFFILKPTLPLQDKLSQIFEEISALLQAKARLFDPDNKENVEQLLFELSLQNTQVAQSLNQIRSSLLTRLKASRVSNKSIYWLNLYFFAQDIHEQATSNYLHYEHIQQNFSRSDLIFRFQKNLRLQAQACHDLAQCILHNQQYQSSQESQIGLNHLESSLKDWIQQHPQNFEVKNLKLIFNNLKGMHEQFEQLQYAQPFNETLSQNKQEHLNLLDDDIQGFSDLVLKIRQQLTPQSALFRHAVRIAVVFAAGYAISLLPFAQHGYWILLTSLFVCQITYFATKSRLKLRTIGTLLGVLLGIPILYFVPSIEGQLILTIICGVSFFYLRQKKYALATLMATLMVLLIFNLKGAGYSIILPRLIDTLLGCFIAWLAVNFIWPDWNFRNIPNNIKKSSQATFDYFNVIVEQYQHGKNQDIEYRRIRRAAHNAQIELSNMISSLSAEPNPNPELIHYAFRYLVYSHSQLSYVAALGSQRQKIDDQQVLQLLLDCQQILKQSLFEQASVNFSFLEQTLKQIQSLITHEHFSENYTLVLKQMSLLLETLPELLSLKGKLLEHEIK
1Y1U Chain:A ((156-270))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QDTENEL--KKLQQ--TQEYFIIQYQESLRIQAQ----FAQLGQLNPQERMSRET--ALQQKQVSLETWLQREAQTLQQYRVEL-----------------AEKHQKTLQLLRKQQTIILDDEL-----IQWKRRQQL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 138 -2275 -16.49 -21.46
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -16.49
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.311

(partial model without unconserved sides chains):
PDB file : Tito_1Y1U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y1U-query.scw
PDB file : Tito_Scwrl_1Y1U.pdb: