Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIDYTQFPDANGHFGIHGGRFVSETLMAALEDLENLYSRMKNDEQFLAEFDRDLAYYVGRPSPLYYAERWSKELGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATATIAARLGLECVVYMGAEDVKRQAMNVYRMRLLGATVVPVQSGSKTLKDAMNEAMRDWVTNVDTTYYVIGTVAGPHPYPQLVRDFQSIIGREARKQILEQAGRLPDALVACVGGGSNAMGLFYPFLNDASVKMYGVEAAGFGIETGKHSAPLNAGHVGVLHGNRTYLMSDEQGQIIETHSISAGLDYPGVGPEHSFLKDMKRVEYVPINDTGALQGFRDLTKIEGIIPALESSHAMAYVSKLAPTMSKDQIIIATVSGRGDKDLMTVARIDGVEMVEM
5EY5 Chain:B ((1-383))-----------GRFGKYGGQYVPETLMPALEELEEAYERAKNDPEFQAELEYYLRDYVGRPTPLYFAENLTKDLGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGKKRVIAETGAGQHGVATATVAAMFGLECVVYMGAEDIERQALNVFRMKLLGAKVRPVTSGSRTLKDAINEAMRDWVTNVEDTFYIIGSVVGPHPYPMMVRDFQSVIGEEARQQILEKEGRLPDAIVACVGGGSNAMGIFHPFIDDESVRLIGVEAAGKGIETGKHAATLSAGRPGVLHGAMTYLLQDEDGQIIEAHSISAGLDYPGVGPEHAYLKDTGRAEYVSVTDDEALEAFQLLSRTEGIIPALESSHAVAYAMKLAPELSKDQIIVVNLSGRGDKDVNTVAR---------


General information:
TITO was launched using:
RESULT:

Template: 5EY5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2631 -159928 -60.79 -417.57
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.90

3D Compatibility (PKB) : -60.79
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_5EY5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EY5-query.scw
PDB file : Tito_Scwrl_5EY5.pdb: