Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSMADATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATKEAIEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFGFPVIIRPSFTMGGSGGGIAYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPMGVHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIPRFNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKIEAGATNVKETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVNTEAQVKTLGFGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAEFESGTAYMYSTYDEECEANPS-NRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETVSTDYDISDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLARALEEAGTPIIGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGISEAAKVGYPLVVRPSYVLGGRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVDVDCVSDGKDVVIGGIMQHIEQAGIHSGDSACSIPPYSLSKEIQNEMRRQTIAMAKELGVVGLMNVQFAVKGNDIYVLEVNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTKEIIPNRFAVKEAVFPFAKFPGVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPGLPTEGEVKH--AFLSVRESDKKYIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVTEGRPHIVDRLKNGEIHLIVNTTEGKQAQYDSAMIRRAALQGKVYYTTTINGAEAVCQAFAVKLPMDVYRLQDLTVG
1JDB Chain:B ((1-1068))MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGADRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVR--------AMEIVYDEADLRRYFQTAV--------LLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMK--------KHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEM---


General information:
TITO was launched using:
RESULT:

Template: 1JDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 7060 -210433 -29.81 -200.60
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.91

3D Compatibility (PKB) : -29.81
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.687

(partial model without unconserved sides chains):
PDB file : Tito_1JDB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JDB-query.scw
PDB file : Tito_Scwrl_1JDB.pdb: