Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVQVKLLDPRLGKEWPLPSYATAGSAGLDLRACLDEAIEIEPGQTVLVKTGMAIYIHDVNFAGLILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSVWNRGQTTFRLEPGERLAQYVLVPVVQAEFEQVEEFEETLRGAGGFGHTGKQ
1DUP Chain:A ((4-136))-KIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDF----------------


General information:
TITO was launched using:
RESULT:

Template: 1DUP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 576 -89719 -155.76 -674.58
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -155.76
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_1DUP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DUP-query.scw
PDB file : Tito_Scwrl_1DUP.pdb: