Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNQEIVVILGNADKRDWHFILVQLFFQLLGRRDRLFKTYFRFNKIQDNPFRIMNLMLLIFIVLWLGYINHDFLISSFSSLGIFTFFYYQNIPMKYLLKRMFLIGCGLLVAFVLGILSTYVLWLEPFAVALVAFSSRFVLRLFHISKPGGLFFAMLSAMGTSMQLPIAQLPIVSLYFFMGVVFALIAAVITKLLDSRPEQTIEKATLKERFHEEPLVIIDSVFYSAALFLSVYVSHGLNLHNPYWLTLSCASILLAENLDAMKHRQVQYLIGSMGGLCVSAFLSFVPFTQLQTIFLITFLYGIAQFLVARNYAVANIFLNPMALMLSTLIRGAYLISLIEYRFLGIVIGSFIGLGVAWVMTVGLQHYLTVVRQKLE
5I1M Chain:V ((777-821))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFALTCAVLVLMEGTSAMLHSLRLHWVESMSKFFVGEGLPYEPFA---------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5I1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain V - contact count / total energy / energy per contact / energy per residue : 62 -6252 -100.83 -138.92
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain V : 0.39

3D Compatibility (PKB) : -100.83
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.39
QMean score : 0.168

(partial model without unconserved sides chains):
PDB file : Tito_5I1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I1M-query.scw
PDB file : Tito_Scwrl_5I1M.pdb: