Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRTLKELILAAEFAAIISVLSQMT-IPFGL--VPLTGQTFAIGLTATFLGRKLGLISVGVYLLLGLIGLPVFSGMTGGIAVLFGPTGGYLIGFLLQTWITGWMIER---TDAHYLYA--IFANLMGSLAALICGTIWLKISGDLTFTTAFASGLLPFLLPEAIKATGAAYIGILMKKRLNRFLHTN
4DVE Chain:A ((14-189))-NQKVKTLTYSAFMTAFIIILGFLPGIPIGFIPVPIILQNMGIMMAGGLLGPKYGTISVGAFLALALIGLPVLTGGNGGAASFLGPSGGYRIAWLFTPFLIGFFLKKLKITTSQNWFGELIIVLLFGVIFVDFVGAIWLSFQSNIPLLTSLISNLV-FIPGDCIKAI----LTVVIVRRLRK-----


General information:
TITO was launched using:
RESULT:

Template: 4DVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 764 -92160 -120.63 -548.57
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -120.63
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.257

(partial model without unconserved sides chains):
PDB file : Tito_4DVE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DVE-query.scw
PDB file : Tito_Scwrl_4DVE.pdb: