Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNKVILSISLAAALLFAAGCSANNTTSSSSSTESSKSTSTAESTTASSVDLNALELPQLTKDVAENEDLVEMVTNKGTIKIKLFPEYAPKAVENFMTHAKDGYYNGLTFHRVIKDFMIQGGDPKGDGTGGESIWGEGFETEINNHLYNIRG-ALSMARSQDPNSNGSQFFIVQNTDDMHDGLLKDDYPQAIIDAYKNGGYPSLDGHYTVFGQVIEGMDVVDAIANIETDS-SDKPKEEVKIDKINILQEAKQK
2A2N Chain:A ((28-175))---------------------------------------------------------------------------TSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGS-NTNGSQFFI------------------TVVPT------PWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV-------


General information:
TITO was launched using:
RESULT:

Template: 2A2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 732 -6389 -8.73 -43.76
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -8.73
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_2A2N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2A2N-query.scw
PDB file : Tito_Scwrl_2A2N.pdb: