Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKRALFPGSFDPFTKGHLDTVERAAKLFDEVVIGVFINTSKKSLFPPEERMTLITKAVSHLPNVKVMHQENQLTVETAKEIGADALIRGIRSIKDFEYEREIAQMNHHLYDELETVFLLAKPEYSHVSSSILKEVLHFGGDVSSYLPPVINEALAGKRESNES
3ND5 Chain:A ((3-158))-KIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFI------LFTPEEKKYLIEEATKEMPNVRVIMQETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQK------


General information:
TITO was launched using:
RESULT:

Template: 3ND5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 677 -90189 -133.22 -601.26
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -133.22
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_3ND5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ND5-query.scw
PDB file : Tito_Scwrl_3ND5.pdb: