Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMTDPIADFLTRIRNANMVKHESLEVPASKIKRDIAEILKREGFVRDVEYIEDDKQGVIRVFLKFGKNGERVITNLKRISKPGLRAYVKADEVPKVLNGLGIAIISTSEGVVTDKEAREKNIGGEVIAYVW
4PDB Chain:A ((27-155))---TDPIADMLTRIRNANMVRHEKLEVPASKIKKEIAELLKREGFIRDVEYIEDNKQGILRIFLKYGANNERVITGLKRISKPGLRVYAKADEVPRVLNGLGIALVSTSKGVMTDKDARQLQTGGEVVAYVW


General information:
TITO was launched using:
RESULT:

Template: 4PDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 585 -74171 -126.79 -574.97
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.94

3D Compatibility (PKB) : -126.79
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.94
QMean score : 0.642

(partial model without unconserved sides chains):
PDB file : Tito_4PDB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PDB-query.scw
PDB file : Tito_Scwrl_4PDB.pdb: