Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPKKRKLLDLLMLFLLLSGIGILAYPFVSDALNNYLDQQIISHYQQQAVKENEEVMAKIQENMTKKNQQLAKEGGNPGADPFTKKKEPA--KKDRTYFEKHTIGILTIPEINVHLPIFDETNTVLLEKGASLLEGTSYPTGGENTHAVISSHRGLPQAKLFTDLPKLTLGDSFYIEINGRTLAYQVDQIKTVEPTDTKDLRIEKGQDFVTLLTCTPYMVNSHRLLVRGHRVPYHAKEVQKEVQKVSENKRFFLYGLLAACILIFLLLIYLFRQSFKIRNRS
3RBK Chain:A ((60-218))--------------------------------------------------------------------------------DPYSAEQ---VVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEKT--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 820 -13025 -15.88 -85.13
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -15.88
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_3RBK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RBK-query.scw
PDB file : Tito_Scwrl_3RBK.pdb: