Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDFYALQDTLLRNAKSGGSSDTVDVESRYVLMEKIGSGSYGDVWSATRRTGTKDIYAVKRIDKRQAGTKGLRSVMGEVETMSLLSHPNIVKLEETYQDEACLSIVMEYLPGGSLQHRI-DRQNVSELETRRFITQLLMAVEYIHEKGIVHRDLKPSNCLLS--QNDLVVKISDFGLSVFAGNKQCLTTCCGTLHFMAPEILLE---KNYGKPVDMWAMGVMAHVMFLGRYPF-QARTEAALTKDICRG-YRPREEGGGGLRCPPLLQDFISQLLLYDPLRRMSAKDALKHPWIKEGLDANRRTSLYPSQAPSATAMKPSARWRAAALAVMGVQRLLYLQKIQRLVRLGYDGFPILRDYRYLVTGKYVPASTSVECSHMFHARPMALLELISMIDTCPFLKHVDLSWNNIHSLSVIQALLKVVTRHPSLQSIDLSHNPIPAVAGRSIVRLIRNPLSQVTCINVGDTGISADTIGQINSFLKEKLTPAALSYSVSTGDMQSRLTQGSGDDTLMTSSSTTVSSLQQKRSICSGPPKQPAKKESRGVRLPPISRPPVARRHGKMP
2YCF Chain:A ((11-300))---------------------------EYIMSKTLGSGACGEVKLAFERKTCKKV-AIKIISK---------NVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKAL--DLVKKLLVVDPKARFTTEEALRHPWLQDE-DMKRKFQDLLSEENESTAL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2YCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1200 -34719 -28.93 -130.03
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -28.93
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_2YCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YCF-query.scw
PDB file : Tito_Scwrl_2YCF.pdb: