Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKEIKRRNRMKNKRLIGIIAALAVLVAGSLIYSSMNKSEAQNNKDEKKITKIGVLQFV-SHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIATPA--AQGLASA--TKDLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHNPAQQQVELIKALTP--NVK--TIGALYSS--SEDNSKTQVEEFKAYAEKAGLT---VETFAV--PSTNEIASTVTVMT---SK--VDAIWVPIDNTIASGFPTVVSSNQS-SKKPIYPSATAM-----VEVGGL----ASVVIDQHDLGVATGKMIVQVLKGAKPADTPVNVFSIGKSVINKKIAQELGITIPESVLKEAGQVIE
4KZK Chain:A ((37-310))--------------------------------------------------VKIGFVVKQPDDPWFQDEWRFAEQAAKDKHF-----TLVKIAA-PSGEKVSTALDSLAAQKAQGVIICAPDVKLGPGIAAKAKRYGMKLMSVDDQLVDGRGA--P--LADVPHMGISAYRIGRQVGDAIAAEAKRRGWNPAEVGVLRLAYDQLPTARERTTGAVDALKAAGFAAANVVDAPEMTADTEGAFNAANIAFTKHRNFRHWVAFGSNDDTTVGAVRAGEGRGIGTDDMIAVGINGSQVALNEFAKPKPTGFFGSILLNPRLHGYDTSVNMYDWITQNR-----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4KZK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1272 34946 27.47 143.81
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 27.47
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_4KZK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KZK-query.scw
PDB file : Tito_Scwrl_4KZK.pdb: